Regulon of AmtR in Nocardia farcinica IFM 10152

Properties
Regulator type:	Transcription factor
TF locus tag:	nfa22230
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Nitrogen metabolism
Effector:	GlnK-AMP, signal transduction protein
Regulog:	AmtR - Nocardiaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 7 sites [see more]

Member of regulog collections

By taxonomy - Nocardiaceae
By trascription factor - AmtR
By TF family - TetR
By effector - GlnK-AMP, signal transduction protein
By pathway - Nitrogen metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -160 Score: 6.7 Sequence: AATATCTGTCGGTTGATAGTTTTG Locus tag: nfa22230 Name: amtR Funciton: Transcriptional regulator of urea utilization, TetR family
	nfa22230	amtR	Transcriptional regulator of urea utilization, TetR family
Position: -51 Score: 6.4 Sequence: CAAAACTATCAACCGACAGATATT Locus tag: nfa22220 Name: uctT Funciton: Urea carboxylase-related transporter, Amino acid permease family Locus tag: nfa22210 Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: nfa22200 Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: nfa22190 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) Locus tag: nfa22180 Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54)
	nfa22220	uctT	Urea carboxylase-related transporter, Amino acid permease family
	nfa22210	amt1	Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
	nfa22200	amt2	Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
	nfa22190	ucaA	Urea carboxylase (EC 6.3.4.6)
	nfa22180	ucaB	Allophanate hydrolase (EC 3.5.1.54)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD