Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HrcA in Nocardia farcinica IFM 10152

Properties
Regulator type: Transcription factor
TF locus tag: nfa14250
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: HrcA - Nocardiaceae
Statistics of regulated genes:
- Genes 5
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -201
Score: 6.3
Sequence: CTTGCACTCGCCACCCCCGAGTGCTAG
Position: -166
Score: 7
Sequence: TTGGCACTCTCGACCTGTGAGTGCCAG
Locus tag: nfa52750
Name: groL2
Funciton: Heat shock protein 60 family chaperone GroEL
groL2
Heat shock protein 60 family chaperone GroEL

Position: -52
Score: 6.7
Sequence: TTGGCACTGTCGGCGGTAGAGTGCTAG
Locus tag: nfa49550
Name: COG2331
Funciton: conserved hypothetical protein
COG2331
conserved hypothetical protein

Position: -85
Score: 6.7
Sequence: TTAGCACTCTACCCCGAAGAGTGCTAA
Locus tag: nfa8400
Name: hsp18
Funciton: Small heat shock protein 18
hsp18
Small heat shock protein 18

Position: -223
Score: 6.6
Sequence: CTGGCACTCTCGTGTATAGAGTGCTAG
Locus tag: nfa8860
Name: groS
Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: nfa8870
Name: groL
Funciton: Heat shock protein 60 family chaperone GroEL
groS
Heat shock protein 60 family co-chaperone GroES
groL
Heat shock protein 60 family chaperone GroEL
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD