Regulon of HrcA in Nocardia farcinica IFM 10152
| Regulator type: | Transcription factor |
| TF locus tag: | nfa14250 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - HrcA
- By taxonomy - Nocardiaceae
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -201
Score: 6.3 Sequence: CTTGCACTCGCCACCCCCGAGTGCTAG
Position: -166
Score: 7 Sequence: TTGGCACTCTCGACCTGTGAGTGCCAG
Locus tag: nfa52750
Name: groL2 Funciton: Heat shock protein 60 family chaperone GroEL |
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groL2
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Heat shock protein 60 family chaperone GroEL
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Position: -52
Score: 6.7 Sequence: TTGGCACTGTCGGCGGTAGAGTGCTAG
Locus tag: nfa49550
Name: COG2331 Funciton: conserved hypothetical protein |
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COG2331
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conserved hypothetical protein
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Position: -85
Score: 6.7 Sequence: TTAGCACTCTACCCCGAAGAGTGCTAA
Locus tag: nfa8400
Name: hsp18 Funciton: Small heat shock protein 18 |
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hsp18
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Small heat shock protein 18
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Position: -223
Score: 6.6 Sequence: CTGGCACTCTCGTGTATAGAGTGCTAG
Locus tag: nfa8860
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: nfa8870
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |