Regulon of NrdR in Nocardia farcinica IFM 10152
| Regulator type: | Transcription factor |
| TF locus tag: | nfa37980 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NrdR
- By taxonomy - Nocardiaceae
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -223
Score: 3.8 Sequence: TCGCAACATGTCGTGT
Position: -191
Score: 4.9 Sequence: CCACTAGGTGTAGTGT
Locus tag: nfa43090
Name: nrdH Funciton: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Locus tag: nfa43080
Name: nrdI Funciton: Ribonucleotide reduction protein NrdI
Locus tag: nfa43070
Name: nrdEF Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) / Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) |
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nrdH
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Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
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nrdI
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Ribonucleotide reduction protein NrdI
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nrdEF
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Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) / Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
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Position: -124
Score: 4.5 Sequence: ACACAACACCTTGTGT
Position: -92
Score: 4.1 Sequence: ACACAACGAGTAGTGT
Locus tag: nfa42980
Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) |
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nrdF
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Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |