Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NrdR - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Nocardia farcinica IFM 10152 4 2
Rhodococcus erythropolis PR4 4 1
Rhodococcus opacus B4 4 1
Rhodococcus sp. RHA1 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdH
*
Nocardia farcinica IFM 10152

Site:
position = -191
score = 4.9255
sequence = CCACTAGGTGTAGTGT

Site:
position = -223
score = 3.76968
sequence = TCGCAACATGTCGTGT

Gene: nfa43090: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Rhodococcus erythropolis PR4

Site:
position = -133
score = 4.9255
sequence = CCACTAGGTGTAGTGT

Site:
position = -165
score = 3.7385
sequence = TCACAACATCTCGCGT

Gene: RER_23500: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Rhodococcus opacus B4

Site:
position = -188
score = 4.23484
sequence = TCACAACATCTCGGGT

Site:
position = -156
score = 4.9255
sequence = CCACTAGGTGTAGTGT

Gene: ROP_64920: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Rhodococcus sp. RHA1

Site:
position = -188
score = 4.23484
sequence = TCACAACATCTCGGGT

Site:
position = -156
score = 4.9255
sequence = CCACTAGGTGTAGTGT

Gene: RHA1_ro06439: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
nrdI
 
Nocardia farcinica IFM 10152

Gene: nfa43080: Ribonucleotide reduction protein NrdI
 
Rhodococcus erythropolis PR4

Gene: RER_23510: Ribonucleotide reduction protein NrdI
 
Rhodococcus opacus B4

Gene: ROP_64930: Ribonucleotide reduction protein NrdI
 
Rhodococcus sp. RHA1

Gene: RHA1_ro06440: Ribonucleotide reduction protein NrdI
Ribonucleotide reduction protein NrdI
nrdE
 
Nocardia farcinica IFM 10152

Gene: nfa43070: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) / Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Rhodococcus erythropolis PR4

Gene: RER_23520: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) @ intein-containing
 
Rhodococcus opacus B4

Gene: ROP_64940: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) @ intein-containing
 
Rhodococcus sp. RHA1

Gene: RHA1_ro06441: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) @ intein-containing
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) @ intein-containing
nrdF
*
Nocardia farcinica IFM 10152

Site:
position = -124
score = 4.47637
sequence = ACACAACACCTTGTGT

Site:
position = -92
score = 4.08085
sequence = ACACAACGAGTAGTGT

Gene: nfa42980: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Rhodococcus erythropolis PR4

Gene: RER_23530: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Rhodococcus opacus B4

Gene: ROP_64950: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro06442: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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