Regulon of RhaR in Nocardia farcinica IFM 10152
| Regulator type: | Transcription factor |
| TF locus tag: | nfa32970 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Regulog: | RhaR - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By TF family - LacI
- By effector - Rhamnose
- By pathway - Rhamnose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -34
Score: 5.7 Sequence: GTATTGAAACGTTTCAACGA
Locus tag: nfa32910
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: nfa32920
Name: rhaY Funciton: Predicted L-rhamnose permease RhaY
Locus tag: nfa32930
Name: rhaI Funciton: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
Locus tag: nfa32940
Name: rhaEW Funciton: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: nfa32950
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: nfa32960
Name: lldD Funciton: L-lactate dehydrogenase (EC 1.1.2.3)
Locus tag: nfa32970
Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, LacI family |
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rhaM
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L-rhamnose mutarotase
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rhaY
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Predicted L-rhamnose permease RhaY
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rhaI
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Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
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rhaEW
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Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
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rhaB
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Rhamnulokinase (EC 2.7.1.5)
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lldD
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L-lactate dehydrogenase (EC 1.1.2.3)
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rhaR
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Transcriptional regulator of rhamnose utilization, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |