Regulons of Saccharophagus degradans 2-40

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	3	2
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	CueR	Copper ion, (Cu+)	Copper resistance	3	3
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	4	4
TF	LexA	DNA damage	SOS response	13	8
TF	MetR	Homocysteine	Methionine biosynthesis	2	4
TF	NagR	N-acetylglucosamine	N-acetylglucosamine utilization	5	6
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	5
TF	NsrR	Nitric oxide	Nitrosative stress response	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	5
TF	PsrA	Oleate	Fatty acid degradation	7	2
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	2	2
TF	ScrR	Sucrose	Sucrose utilization	2	4
TF	Sde_3525		Multidrug resistance; Multidrug efflux	1	1
TF	YjiR2		Metabolite transport	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	6	3
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	3

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --