Regulons of Saccharophagus degradans 2-40
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
BirA |
Biotin |
Biotin biosynthesis |
3 |
2 |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
1 |
1 |
| TF |
CueR |
Copper ion, (Cu+) |
Copper resistance |
3 |
3 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
4 |
4 |
| TF |
LexA |
DNA damage |
SOS response |
13 |
8 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
2 |
4 |
| TF |
NagR |
N-acetylglucosamine |
N-acetylglucosamine utilization |
5 |
6 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
5 |
| TF |
NsrR |
Nitric oxide |
Nitrosative stress response |
1 |
2 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
5 |
5 |
| TF |
PsrA |
Oleate |
Fatty acid degradation |
7 |
2 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
2 |
2 |
| TF |
ScrR |
Sucrose |
Sucrose utilization |
2 |
4 |
| TF |
Sde_3525 |
|
Multidrug resistance; Multidrug efflux |
1 |
1 |
| TF |
YjiR2 |
|
Metabolite transport |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
6 |
3 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
4 |
3 |
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