Regulon of LexA in Saccharophagus degradans 2-40
| Regulator type: | Transcription factor |
| TF locus tag: | Sde_1787 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -163
Score: 5.2 Sequence: TACTGTATAAAAAACTATTA
Locus tag: Sde_1288
Name: recA Funciton: Recombinase A
Locus tag: Sde_1289
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -41
Score: 5.3 Sequence: TACTGTATATTCATCCAATC
Locus tag: Sde_1787
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Locus tag: Sde_1786
Name: sulA Funciton: Cell division inhibitor sulA |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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sulA
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Cell division inhibitor sulA
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Position: -38
Score: 5.7 Sequence: TACTGTATAGACATACAGCA
Locus tag: Sde_1030
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Sde_1029
Name: imuB Funciton: DNA polymerase-like protein PA0670 |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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Position: -43
Score: 5.2 Sequence: CACTGTATAAATAACCATAC
Locus tag: Sde_2735
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -46
Score: 5.3 Sequence: TACTGTATACTCGTACAGCA
Locus tag: Sde_0674
Name: yebG Funciton: SOS regulon DNA damage-inducible protein |
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yebG
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SOS regulon DNA damage-inducible protein
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Position: -61
Score: 4.9 Sequence: TGCTGTCTATTTATACATGT
Locus tag: Sde_3764
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -36
Score: 5.9 Sequence: TACTGTATATATAAACATAT
Locus tag: Sde_0425
Name: intIA Funciton: Integron integrase IntI4 |
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intIA
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Integron integrase IntI4
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Position: -30
Score: 5.3 Sequence: AGCTGTATATAACAACAGTA
Locus tag: Sde_1542
Name: topB Funciton: DNA topoisomerase III (EC 5.99.1.2) |
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topB
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DNA topoisomerase III (EC 5.99.1.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |