Regulon of ScrR in Saccharophagus degradans 2-40
| Regulator type: | Transcription factor |
| TF locus tag: | Sde_3960 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose |
| Regulog: | ScrR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - LacI
- By effector - Sucrose
- By pathway - Sucrose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -124
Score: 6.4 Sequence: AATTACAAACGATTGCAAAA
Position: -102
Score: 6.7 Sequence: AATTGCAACCGATTGCAATA
Locus tag: Sde_3964
Name: scrT Funciton: Predicted sucrose permease, MFS family, FucP subfamily |
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scrT
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Predicted sucrose permease, MFS family, FucP subfamily
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Position: -132
Score: 6.7 Sequence: TATTGCAATCGGTTGCAATT
Position: -110
Score: 6.4 Sequence: TTTTGCAATCGTTTGTAATT
Locus tag: Sde_3963
Name: omp(Scr) Funciton: Predicted sucrose-specific TonB-dependent receptor
Locus tag: Sde_3962
Name: scrK Funciton: Fructokinase (EC 2.7.1.4)
Locus tag: Sde_3961
Name: Sde_3961 Funciton: Glycosyl hydrolase family 43, five-bladed beta-propellor domain |
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omp(Scr)
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Predicted sucrose-specific TonB-dependent receptor
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scrK
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Fructokinase (EC 2.7.1.4)
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Sde_3961
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Glycosyl hydrolase family 43, five-bladed beta-propellor domain
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |