Regulon of NagR in Saccharophagus degradans 2-40

Properties
Regulator type:	Transcription factor
TF locus tag:	Sde_3042
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Regulog:	NagR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NagR
By TF family - LacI
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -200 Score: 5.6 Sequence: TTTGACAACGTTGTCTTT Locus tag: Sde_3605 Name: chiA Funciton: Chitinase (EC 3.2.1.14)
	Sde_3605	chiA	Chitinase (EC 3.2.1.14)
Position: -288 Score: 5.4 Sequence: TTTGACAACGTTGTCTAT Position: -257 Score: 5.3 Sequence: AGATACAACGTTGTCATT Locus tag: Sde_3982 Name: chiD Funciton: Chitodextrinase (EC 3.2.1.14)
	Sde_3982	chiD	Chitodextrinase (EC 3.2.1.14)
Position: -141 Score: 5.2 Sequence: TTTGACAACGTTGTCAAA Position: -106 Score: 5.6 Sequence: CATGACAACGTTGTCCAT Locus tag: Sde_3035 Name: omp_nag Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor Locus tag: Sde_3036 Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Sde_3037 Name: hex Funciton: Beta-N-acetylhexosaminidase Locus tag: Sde_3038 Name: nagP Funciton: N-acetylglucosamine transporter, NagP Locus tag: Sde_3039 Name: nagX Funciton: N-acetylglucosamine related transporter, NagX
	Sde_3035	omp_nag	N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
	Sde_3036	nagK	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Sde_3037	hex	Beta-N-acetylhexosaminidase
	Sde_3038	nagP	N-acetylglucosamine transporter, NagP
	Sde_3039	nagX	N-acetylglucosamine related transporter, NagX
Position: -134 Score: 5.7 Sequence: AATGACAACGTTGTCTCG Locus tag: Sde_3041 Name: nagB2 Funciton: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) Locus tag: Sde_3040 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	Sde_3041	nagB2	Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
	Sde_3040	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD