Regulon of NrdR in Saccharophagus degradans 2-40
| Regulator type: | Transcription factor |
| TF locus tag: | Sde_3459 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -451
Score: 3.7 Sequence: CCGCATTATCTTGTAT
Position: -420
Score: 5 Sequence: CCCCCATATATGGTGT
Position: -188
Score: 5.4 Sequence: CCACTATATATAGTGG
Locus tag: Sde_2458
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sde_2459
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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nrdA
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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Position: -63
Score: 4.8 Sequence: CACCTATATATAGTGG
Position: -32
Score: 4.4 Sequence: CAACCACATATAGTTA
Locus tag: Sde_3460
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |