Regulog SdhR - Various betaproteobacteria

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Statistics of regulated genes
Genome	Genes	Operons
Methylobacillus flagellatus KT
Methylophilales bacterium HTCC2181	16	2
Methylotenera mobilis JLW8	18	2
Nitrosomonas europaea ATCC 19718
Nitrosospira multiformis ATCC 25196
Thiobacillus denitrificans
Azoarcus sp. EbN1	14	4
Dechloromonas aromatica RCB	16	5
Thauera sp. MZ1T	15	5
Chromobacterium violaceum ATCC 12472	15	2
Laribacter hongkongensis HLHK9	2	2
Neisseria meningitidis MC58

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
sdhR	Methylobacillus flagellatus KT	* Methylophilales bacterium HTCC2181 Site: position = -201 score = 5.63336 sequence = TATTAAGTCTTATATAAGAGTAAAAA Site: position = -68 score = 5.54061 sequence = TTTTAACTCTTATATAAGATATAGAA Gene: MB2181_04040: Transcriptional regulator of TCA cycle, GntR family	* Methylotenera mobilis JLW8 Site: position = -115 score = 7.36725 sequence = TCTTATGTCTTATATAAGATATAAAA Gene: Mmol_0754: Transcriptional regulator of TCA cycle, GntR family	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	* Azoarcus sp. EbN1 Site: position = -68 score = 7.05826 sequence = TCTGGTGTCTTATATAAGACATGAGA Gene: ebA6693: Transcriptional regulator of TCA cycle, GntR family	* Dechloromonas aromatica RCB Site: position = -66 score = 6.98049 sequence = TCATATGTCTTATATAAGACAACTTT Gene: Daro_2866: Transcriptional regulator of TCA cycle, GntR family	* Thauera sp. MZ1T Site: position = -68 score = 7.34179 sequence = TCTTATATCTTATATAAGACACAAGA Gene: Tmz1t_2551: Transcriptional regulator of TCA cycle, GntR family	* Chromobacterium violaceum ATCC 12472 Site: position = 77 score = 6.99689 sequence = TCTTATGTCTTATATAAGACTTATCT Gene: CV1063: Transcriptional regulator of TCA cycle, GntR family	* Laribacter hongkongensis HLHK9 Site: position = -62 score = 6.1722 sequence = TTTTATATCTTATATAAGACATGCAT Gene: LHK_02422: Transcriptional regulator of TCA cycle, GntR family	Neisseria meningitidis MC58	Transcriptional regulator of TCA cycle, GntR family
CV1064	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472 Gene: CV1064: hypothetical protein	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	hypothetical protein
sdhC	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04030: Succinate dehydrogenase cytochrome b-556 subunit	Methylotenera mobilis JLW8 Gene: Mmol_0757: Succinate dehydrogenase cytochrome b-556 subunit	Nitrosomonas europaea ATCC 19718 Gene: NE1046: Succinate dehydrogenase cytochrome b-556 subunit	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0863: Succinate dehydrogenase cytochrome b-556 subunit	Thiobacillus denitrificans Gene: Tbd_1182: Succinate dehydrogenase cytochrome b-556 subunit	2 Azoarcus sp. EbN1 Gene: ebD20: Succinate dehydrogenase cytochrome b-556 subunit Gene: ebB154: Succinate dehydrogenase cytochrome b-556 subunit	Dechloromonas aromatica RCB Gene: Daro_2865: Succinate dehydrogenase cytochrome b-556 subunit	2 Thauera sp. MZ1T Gene: Tmz1t_2550: Succinate dehydrogenase cytochrome b-556 subunit Gene: Tmz1t_0123: Succinate dehydrogenase cytochrome b-556 subunit	Chromobacterium violaceum ATCC 12472 Gene: CV1065: Succinate dehydrogenase cytochrome b-556 subunit	Laribacter hongkongensis HLHK9 Gene: LHK_02421: Succinate dehydrogenase cytochrome b-556 subunit	Neisseria meningitidis MC58 Gene: NMB0948: Succinate dehydrogenase cytochrome b-556 subunit	Succinate dehydrogenase cytochrome b-556 subunit
sdhD	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04025: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Methylotenera mobilis JLW8 Gene: Mmol_0758: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Nitrosomonas europaea ATCC 19718 Gene: NE1047: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0862: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Thiobacillus denitrificans Gene: Tbd_1183: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	2 Azoarcus sp. EbN1 Gene: ebB235: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Gene: ebA4576: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Dechloromonas aromatica RCB Gene: Daro_2864: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	2 Thauera sp. MZ1T Gene: Tmz1t_2549: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Gene: Tmz1t_0124: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Chromobacterium violaceum ATCC 12472 Gene: CV1066: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Laribacter hongkongensis HLHK9 Gene: LHK_02420: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Neisseria meningitidis MC58 Gene: NMB0949: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556	Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
sdhA	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04020: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Methylotenera mobilis JLW8 Gene: Mmol_0759: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Nitrosomonas europaea ATCC 19718 Gene: NE1048: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0861: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Thiobacillus denitrificans Gene: Tbd_1184: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Azoarcus sp. EbN1 Gene: ebA6690: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Dechloromonas aromatica RCB Gene: Daro_2863: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Thauera sp. MZ1T Gene: Tmz1t_2548: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Chromobacterium violaceum ATCC 12472 Gene: CV1067: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Laribacter hongkongensis HLHK9 Gene: LHK_02419: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Neisseria meningitidis MC58 Gene: NMB0950: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04015: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Methylotenera mobilis JLW8 Gene: Mmol_0760: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Nitrosomonas europaea ATCC 19718 Gene: NE2371: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0860: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Thiobacillus denitrificans Gene: Tbd_1185: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	2 Azoarcus sp. EbN1 Gene: ebA6689: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Gene: ebA4578: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Dechloromonas aromatica RCB Gene: Daro_2862: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	2 Thauera sp. MZ1T Gene: Tmz1t_2547: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Gene: Tmz1t_0125: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Chromobacterium violaceum ATCC 12472 Gene: CV1068: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Laribacter hongkongensis HLHK9 Gene: LHK_02418: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Neisseria meningitidis MC58 Gene: NMB0951: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
COG2938	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04010: succinate dehydrogenase iron-sulfur subunit	Methylotenera mobilis JLW8 Gene: Mmol_0761: succinate dehydrogenase iron-sulfur subunit	Nitrosomonas europaea ATCC 19718 Gene: NE2372: succinate dehydrogenase iron-sulfur subunit	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0859: succinate dehydrogenase iron-sulfur subunit	Thiobacillus denitrificans Gene: Tbd_1186: succinate dehydrogenase iron-sulfur subunit	Azoarcus sp. EbN1 Gene: ebA6688: succinate dehydrogenase iron-sulfur subunit	Dechloromonas aromatica RCB Gene: Daro_2861: succinate dehydrogenase iron-sulfur subunit	Thauera sp. MZ1T Gene: Tmz1t_2546: succinate dehydrogenase iron-sulfur subunit	Chromobacterium violaceum ATCC 12472 Gene: CV1069: succinate dehydrogenase iron-sulfur subunit	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58 Gene: NMB0952: succinate dehydrogenase iron-sulfur subunit	succinate dehydrogenase iron-sulfur subunit
gltA	Methylobacillus flagellatus KT Gene: Mfla_0061: Citrate synthase (si) (EC 2.3.3.1)	Methylophilales bacterium HTCC2181 Gene: MB2181_00655: Citrate synthase (si) (EC 2.3.3.1)	Methylotenera mobilis JLW8 Gene: Mmol_0197: Citrate synthase (si) (EC 2.3.3.1)	Nitrosomonas europaea ATCC 19718 Gene: NE2373: Citrate synthase (si) (EC 2.3.3.1)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0858: Citrate synthase (si) (EC 2.3.3.1)	Thiobacillus denitrificans Gene: Tbd_1187: Citrate synthase (si) (EC 2.3.3.1)	Azoarcus sp. EbN1 Gene: ebA6687: Citrate synthase (si) (EC 2.3.3.1)	Dechloromonas aromatica RCB Gene: Daro_2860: Citrate synthase (si) (EC 2.3.3.1)	Thauera sp. MZ1T Gene: Tmz1t_2545: Citrate synthase (si) (EC 2.3.3.1)	Chromobacterium violaceum ATCC 12472 Gene: CV1070: Citrate synthase (si) (EC 2.3.3.1)	Laribacter hongkongensis HLHK9 Gene: LHK_02417: Citrate synthase (si) (EC 2.3.3.1)	Neisseria meningitidis MC58 Gene: NMB0954: Citrate synthase (si) (EC 2.3.3.1)	Citrate synthase (si) (EC 2.3.3.1)
odhA	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718 Gene: NE2374: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0857: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Thiobacillus denitrificans Gene: Tbd_1188: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Azoarcus sp. EbN1 Gene: ebA6685: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Dechloromonas aromatica RCB Gene: Daro_2859: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Thauera sp. MZ1T Gene: Tmz1t_2544: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Chromobacterium violaceum ATCC 12472 Gene: CV1071: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Laribacter hongkongensis HLHK9 Gene: LHK_02416: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Neisseria meningitidis MC58 Gene: NMB0955: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
sucB	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718 Gene: NE2375: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0856: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Thiobacillus denitrificans Gene: Tbd_1189: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Azoarcus sp. EbN1 Gene: ebA6684: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Dechloromonas aromatica RCB Gene: Daro_2858: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Thauera sp. MZ1T Gene: Tmz1t_2543: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Chromobacterium violaceum ATCC 12472 Gene: CV1072: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Laribacter hongkongensis HLHK9 Gene: LHK_02415: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Neisseria meningitidis MC58 Gene: NMB0956: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
CV1073	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472 Gene: CV1073: hypothetical protein	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	hypothetical protein
lpdA	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718 Gene: NE2319: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0855: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: ebA6683: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Dechloromonas aromatica RCB Gene: Daro_2857: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Thauera sp. MZ1T Gene: Tmz1t_2542: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Chromobacterium violaceum ATCC 12472 Gene: CV1074: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Laribacter hongkongensis HLHK9 Gene: LHK_02413: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Neisseria meningitidis MC58 Gene: NMB0957: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sucC	Methylobacillus flagellatus KT Gene: Mfla_1889: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Methylophilales bacterium HTCC2181 Gene: MB2181_05725: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Methylotenera mobilis JLW8 Gene: Mmol_0676: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Nitrosomonas europaea ATCC 19718 Gene: NE1810: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A1079: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Thiobacillus denitrificans Gene: Tbd_0805: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472 Gene: CV1075: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Laribacter hongkongensis HLHK9 Gene: LHK_02412: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Neisseria meningitidis MC58 Gene: NMB0959: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
sucD	Methylobacillus flagellatus KT Gene: Mfla_1888: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Methylophilales bacterium HTCC2181 Gene: MB2181_05730: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Methylotenera mobilis JLW8 Gene: Mmol_0677: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans Gene: Tbd_0806: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472 Gene: CV1076: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Laribacter hongkongensis HLHK9 Gene: LHK_02411: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Neisseria meningitidis MC58 Gene: NMB0960: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Mmol_0755	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8 Gene: Mmol_0755: hypothetical protein	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	hypothetical protein
MB2181_04035	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04035: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))	Methylotenera mobilis JLW8 Gene: Mmol_0756: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans Gene: Tbd_1181: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))
citE	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04005: Citrate lyase beta chain (EC 4.1.3.6)	Methylotenera mobilis JLW8 Gene: Mmol_0762: Citrate lyase beta chain (EC 4.1.3.6)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: p1B303: Citrate lyase beta chain (EC 4.1.3.6)	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Citrate lyase beta chain (EC 4.1.3.6)
MB2181_04000	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04000: acetyl-coenzyme A synthetase family protein	Methylotenera mobilis JLW8 Gene: Mmol_0763: acetyl-coenzyme A synthetase family protein	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	acetyl-coenzyme A synthetase family protein
fumA	Methylobacillus flagellatus KT Gene: Mfla_1918: Fumarate hydratase class I (EC 4.2.1.2)	Methylophilales bacterium HTCC2181 Gene: MB2181_03995: Fumarate hydratase class I (EC 4.2.1.2)	Methylotenera mobilis JLW8 Gene: Mmol_0764: Fumarate hydratase class I (EC 4.2.1.2)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: ebA173: Fumarate hydratase class I (EC 4.2.1.2)	Dechloromonas aromatica RCB Gene: Daro_1627: Fumarate hydratase class I (EC 4.2.1.2)	Thauera sp. MZ1T Gene: Tmz1t_2653: Fumarate hydratase class I (EC 4.2.1.2)	Chromobacterium violaceum ATCC 12472 Gene: CV3476: Fumarate hydratase class I (EC 4.2.1.2)	Laribacter hongkongensis HLHK9 Gene: LHK_02542: Fumarate hydratase class I (EC 4.2.1.2)	Neisseria meningitidis MC58 Gene: NMB1613: Fumarate hydratase class I (EC 4.2.1.2)	Fumarate hydratase class I (EC 4.2.1.2)
Mmol_0765	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8 Gene: Mmol_0765: hypothetical protein	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	hypothetical protein
acnB	Methylobacillus flagellatus KT Gene: Mfla_1817: Aconitate hydratase (EC 4.2.1.3)	Methylophilales bacterium HTCC2181 Gene: MB2181_05525: Aconitate hydratase (EC 4.2.1.3)	Methylotenera mobilis JLW8 Gene: Mmol_0766: Aconitate hydratase (EC 4.2.1.3)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: ebA5265: Aconitate hydratase (EC 4.2.1.3)	Dechloromonas aromatica RCB Gene: Daro_2882: Aconitate hydratase (EC 4.2.1.3)	* Thauera sp. MZ1T Site: position = -94 score = 5.40436 sequence = CCGCAAGTCTTATAAAAGACATATAA Gene: Tmz1t_2008: Aconitate hydratase (EC 4.2.1.3)	Chromobacterium violaceum ATCC 12472 Gene: CV2470: Aconitate hydratase (EC 4.2.1.3)	Laribacter hongkongensis HLHK9 Gene: LHK_02151: Aconitate hydratase (EC 4.2.1.3)	Neisseria meningitidis MC58 Gene: NMB1572: Aconitate hydratase (EC 4.2.1.3)	Aconitate hydratase (EC 4.2.1.3)

CRON 2.
COG2301	Methylobacillus flagellatus KT	* Methylophilales bacterium HTCC2181 Site: position = -270 score = 5.54061 sequence = TTCTATATCTTATATAAGAGTTAAAA Site: position = -137 score = 5.63336 sequence = TTTTTACTCTTATATAAGACTTAATA Gene: MB2181_04045: Citrate lyase beta subunit	* Methylotenera mobilis JLW8 Site: position = -91 score = 7.36725 sequence = TTTTATATCTTATATAAGACATAAGA Gene: Mmol_0753: Citrate lyase beta subunit	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Citrate lyase beta subunit
COG2030	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04050: Acyl dehydratase	Methylotenera mobilis JLW8 Gene: Mmol_0752: Acyl dehydratase	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Acyl dehydratase
citE	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04055: Citrate lyase beta chain (EC 4.1.3.6)	Methylotenera mobilis JLW8 Gene: Mmol_0751: Citrate lyase beta chain (EC 4.1.3.6)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: ebA6697: Citrate lyase beta chain (EC 4.1.3.6)	Dechloromonas aromatica RCB Gene: Daro_2868: Citrate lyase beta chain (EC 4.1.3.6)	Thauera sp. MZ1T Gene: Tmz1t_2553: Citrate lyase beta chain (EC 4.1.3.6)	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Citrate lyase beta chain (EC 4.1.3.6)
prpB	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04060: Methylisocitrate lyase (EC 4.1.3.30)	Methylotenera mobilis JLW8 Gene: Mmol_0750: Methylisocitrate lyase (EC 4.1.3.30)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0865: Methylisocitrate lyase (EC 4.1.3.30)	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472 Gene: CV2057: Methylisocitrate lyase (EC 4.1.3.30)	Laribacter hongkongensis HLHK9 Gene: LHK_02306: Methylisocitrate lyase (EC 4.1.3.30)	Neisseria meningitidis MC58 Gene: NMB0430: Methylisocitrate lyase (EC 4.1.3.30)	Methylisocitrate lyase (EC 4.1.3.30)
gltA	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04065: 2-methylcitrate synthase (EC 2.3.3.5)	Methylotenera mobilis JLW8 Gene: Mmol_0749: 2-methylcitrate synthase (EC 2.3.3.5)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0866: 2-methylcitrate synthase (EC 2.3.3.5)	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472 Gene: CV2056: 2-methylcitrate synthase (EC 2.3.3.5)	Laribacter hongkongensis HLHK9 Gene: LHK_02308: 2-methylcitrate synthase (EC 2.3.3.5)	Neisseria meningitidis MC58 Gene: NMB0431: 2-methylcitrate synthase (EC 2.3.3.5)	2-methylcitrate synthase (EC 2.3.3.5)
prpD	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181 Gene: MB2181_04070: 2-methylcitrate dehydratase (EC 4.2.1.79)	Methylotenera mobilis JLW8 Gene: Mmol_0748: 2-methylcitrate dehydratase (EC 4.2.1.79)	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0871: 2-methylcitrate dehydratase (EC 4.2.1.79)	Thiobacillus denitrificans	Azoarcus sp. EbN1	Dechloromonas aromatica RCB	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	2-methylcitrate dehydratase (EC 4.2.1.79)
mdh	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718 Gene: NE0773: Malate dehydrogenase (EC 1.1.1.37)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A0864: Malate dehydrogenase (EC 1.1.1.37)	Thiobacillus denitrificans	* Azoarcus sp. EbN1 Site: position = -175 score = 7.05826 sequence = TCTCATGTCTTATATAAGACACCAGA Gene: ebA6695: Malate dehydrogenase (EC 1.1.1.37)	* Dechloromonas aromatica RCB Site: position = -160 score = 6.98049 sequence = AAAGTTGTCTTATATAAGACATATGA Gene: Daro_2867: Malate dehydrogenase (EC 1.1.1.37)	* Thauera sp. MZ1T Site: position = -201 score = 7.34179 sequence = TCTTGTGTCTTATATAAGATATAAGA Gene: Tmz1t_2552: Malate dehydrogenase (EC 1.1.1.37)	* Chromobacterium violaceum ATCC 12472 Site: position = -162 score = 6.99689 sequence = AGATAAGTCTTATATAAGACATAAGA Gene: CV1062: Malate dehydrogenase (EC 1.1.1.37)	* Laribacter hongkongensis HLHK9 Site: position = -189 score = 6.1722 sequence = ATGCATGTCTTATATAAGATATAAAA Gene: LHK_02423: Malate dehydrogenase (EC 1.1.1.37)	Neisseria meningitidis MC58	Malate dehydrogenase (EC 1.1.1.37)

CRON 3.
COG1024	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: ebA3691: Enoyl-CoA hydratase (EC 4.2.1.17)	* Dechloromonas aromatica RCB Site: position = -81 score = 6.2636 sequence = TATTATATCTTATAGAAGACATGGCA Gene: Daro_4012: Enoyl-CoA hydratase (EC 4.2.1.17)	Thauera sp. MZ1T Gene: Tmz1t_3491: Enoyl-CoA hydratase (EC 4.2.1.17)	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Enoyl-CoA hydratase (EC 4.2.1.17)

CRON 4.
aceA	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	* Azoarcus sp. EbN1 Site: position = -179 score = 6.46596 sequence = TCTTATATCTTATATAAGACCTGTTG Gene: ebA4473: Isocitrate lyase (EC 4.1.3.1)	* Dechloromonas aromatica RCB Site: position = -127 score = 6.40839 sequence = TCTTATGTCTTATATAAGACTATTGC Gene: Daro_3098: Isocitrate lyase (EC 4.1.3.1)	* Thauera sp. MZ1T Site: position = -168 score = 7.30789 sequence = TCTTATGTCTTATATAAGACATATTG Gene: Tmz1t_1247: Isocitrate lyase (EC 4.1.3.1)	Chromobacterium violaceum ATCC 12472 Gene: CV1641: Isocitrate lyase (EC 4.1.3.1)	Laribacter hongkongensis HLHK9 Gene: LHK_02742: Isocitrate lyase (EC 4.1.3.1)	Neisseria meningitidis MC58	Isocitrate lyase (EC 4.1.3.1)

CRON 5.
acnA2/acnD	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718 Gene: NE1002: Aconitate hydratase (EC 4.2.1.3)	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	* Azoarcus sp. EbN1 Site: position = -266 score = 4.94604 sequence = TTATATGTCTTTTATAAGACTGGGTG Gene: ebA5264: Aconitate hydratase (EC 4.2.1.3)	Dechloromonas aromatica RCB	* Thauera sp. MZ1T Site: position = -339 score = 5.40436 sequence = TTATATGTCTTTTATAAGACTTGCGG Gene: Tmz1t_2007: Aconitate hydratase (EC 4.2.1.3)	Chromobacterium violaceum ATCC 12472 Gene: CV1121: Aconitate hydratase (EC 4.2.1.3)	Laribacter hongkongensis HLHK9 Gene: LHK_02153: Aconitate hydratase (EC 4.2.1.3)	Neisseria meningitidis MC58	Aconitate hydratase (EC 4.2.1.3)

CRON 6.
PF04341	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1	* Dechloromonas aromatica RCB Site: position = -71 score = 6.2636 sequence = TGCCATGTCTTCTATAAGATATAATA Gene: Daro_4011: Putative membrane protein DUF485, clustering with ActP	Thauera sp. MZ1T Gene: Tmz1t_3490: Putative membrane protein DUF485, clustering with ActP	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9 Gene: LHK_01261: Putative membrane protein DUF485, clustering with ActP	Neisseria meningitidis MC58	Putative membrane protein DUF485, clustering with ActP
actP	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Azoarcus sp. EbN1 Gene: ebA3695: Acetate permease ActP (cation/acetate symporter)	Dechloromonas aromatica RCB Gene: Daro_4010: Acetate permease ActP (cation/acetate symporter)	Thauera sp. MZ1T Gene: Tmz1t_3489: Acetate permease ActP (cation/acetate symporter)	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9 Gene: LHK_01260: Acetate permease ActP (cation/acetate symporter)	Neisseria meningitidis MC58	Acetate permease ActP (cation/acetate symporter)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SdhR - Various betaproteobacteria

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --