Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR in Azoarcus sp. EbN1

Properties
Regulator type: Transcription factor
TF locus tag: ebA6693
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR - Various betaproteobacteria
Statistics of regulated genes:
- Genes 14
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 24 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -68
Score: 7.1
Sequence: TCTGGTGTCTTATATAAGACATGAGA
Locus tag: ebA6693
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: ebD20
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: ebB235
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: ebA6690
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: ebA6689
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: ebA6688
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: ebA6687
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: ebA6685
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: ebA6684
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: ebA6683
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR
Transcriptional regulator of TCA cycle, GntR family
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
sdhD
Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
COG2938
succinate dehydrogenase iron-sulfur subunit
gltA
Citrate synthase (si) (EC 2.3.3.1)
odhA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
sucB
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
lpdA
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)

Position: -266
Score: 4.9
Sequence: TTATATGTCTTTTATAAGACTGGGTG
Locus tag: ebA5264
Name: acnA2/acnD
Funciton: Aconitate hydratase (EC 4.2.1.3)
acnA2/acnD
Aconitate hydratase (EC 4.2.1.3)

Position: -179
Score: 6.5
Sequence: TCTTATATCTTATATAAGACCTGTTG
Locus tag: ebA4473
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceA
Isocitrate lyase (EC 4.1.3.1)

Position: -175
Score: 7.1
Sequence: TCTCATGTCTTATATAAGACACCAGA
Locus tag: ebA6695
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: ebA6697
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
mdh
Malate dehydrogenase (EC 1.1.1.37)
citE
Citrate lyase beta chain (EC 4.1.3.6)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD