Regulon of SdhR in Azoarcus sp. EbN1
| Regulator type: | Transcription factor |
| TF locus tag: | ebA6693 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Regulog: | SdhR - Various betaproteobacteria |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By TF family - GntR/Others
- By pathway - Tricarboxylic acid cycle
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -68
Score: 7.1 Sequence: TCTGGTGTCTTATATAAGACATGAGA
Locus tag: ebA6693
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: ebD20
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: ebB235
Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: ebA6690
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: ebA6689
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: ebA6688
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: ebA6687
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: ebA6685
Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: ebA6684
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: ebA6683
Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
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sdhR
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Transcriptional regulator of TCA cycle, GntR family
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sdhC
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Succinate dehydrogenase cytochrome b-556 subunit
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sdhD
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Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
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sdhA
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Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
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sdhB
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Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
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COG2938
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succinate dehydrogenase iron-sulfur subunit
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gltA
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Citrate synthase (si) (EC 2.3.3.1)
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odhA
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2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
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sucB
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Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
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lpdA
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Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
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Position: -266
Score: 4.9 Sequence: TTATATGTCTTTTATAAGACTGGGTG
Locus tag: ebA5264
Name: acnA2/acnD Funciton: Aconitate hydratase (EC 4.2.1.3) |
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acnA2/acnD
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Aconitate hydratase (EC 4.2.1.3)
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Position: -179
Score: 6.5 Sequence: TCTTATATCTTATATAAGACCTGTTG
Locus tag: ebA4473
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1) |
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aceA
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Isocitrate lyase (EC 4.1.3.1)
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Position: -175
Score: 7.1 Sequence: TCTCATGTCTTATATAAGACACCAGA
Locus tag: ebA6695
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: ebA6697
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) |
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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citE
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Citrate lyase beta chain (EC 4.1.3.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |