Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sdhD gene

Properties
Regulog: SdhR - Various betaproteobacteria
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Phylum: Proteobacteria/Beta
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azoarcus sp. EbN1
Position: -68
Score: 7.05826
Sequence: TCTGGTGTCTTATATAAGACATGAGA
Locus tag: ebA6693
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: ebD20
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: ebB235
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: ebA6690
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: ebA6689
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: ebA6688
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: ebA6687
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: ebA6685
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: ebA6684
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: ebA6683
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-lpdA -68 7.1 TCTGGTGTCTTATATAAGACATGAGA ebA6693
Chromobacterium violaceum ATCC 12472
Position: 77
Score: 6.99689
Sequence: TCTTATGTCTTATATAAGACTTATCT
Locus tag: CV1063
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: CV1064
Name: null
Funciton: hypothetical protein
Locus tag: CV1065
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: CV1066
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: CV1067
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: CV1068
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: CV1069
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: CV1070
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: CV1071
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: CV1072
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: CV1073
Name: null
Funciton: hypothetical protein
Locus tag: CV1074
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
Locus tag: CV1075
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: CV1076
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhR-CV1064-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-CV1073-lpdA-sucC-sucD 77 7 TCTTATGTCTTATATAAGACTTATCT CV1063
Dechloromonas aromatica RCB
Position: -66
Score: 6.98049
Sequence: TCATATGTCTTATATAAGACAACTTT
Locus tag: Daro_2866
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Daro_2865
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Daro_2864
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: Daro_2863
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Daro_2862
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Daro_2861
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Daro_2860
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: Daro_2859
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Daro_2858
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Daro_2857
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-lpdA -66 7 TCATATGTCTTATATAAGACAACTTT Daro_2866
Methylophilales bacterium HTCC2181
Position: -201
Score: 5.63336
Sequence: TATTAAGTCTTATATAAGAGTAAAAA
Position: -68
Score: 5.54061
Sequence: TTTTAACTCTTATATAAGATATAGAA
Locus tag: MB2181_04040
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: MB2181_04035
Name: MB2181_04035
Funciton: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))
Locus tag: MB2181_04030
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: MB2181_04025
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: MB2181_04020
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: MB2181_04015
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: MB2181_04010
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: MB2181_04005
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: MB2181_04000
Name: MB2181_04000
Funciton: acetyl-coenzyme A synthetase family protein
Locus tag: MB2181_03995
Name: fumA
Funciton: Fumarate hydratase class I (EC 4.2.1.2)
sdhR-MB2181_04035-sdhC-sdhD-sdhA-sdhB-COG2938-citE-MB2181_04000-fumA -201 5.6 TATTAAGTCTTATATAAGAGTAAAAA MB2181_04040
-68 5.5 TTTTAACTCTTATATAAGATATAGAA
Methylotenera mobilis JLW8
Position: -115
Score: 7.36725
Sequence: TCTTATGTCTTATATAAGATATAAAA
Locus tag: Mmol_0754
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Mmol_0755
Name: null
Funciton: hypothetical protein
Locus tag: Mmol_0756
Name: MB2181_04035
Funciton: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))
Locus tag: Mmol_0757
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Mmol_0758
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: Mmol_0759
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Mmol_0760
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Mmol_0761
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Mmol_0762
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Mmol_0763
Name: MB2181_04000
Funciton: acetyl-coenzyme A synthetase family protein
Locus tag: Mmol_0764
Name: fumA
Funciton: Fumarate hydratase class I (EC 4.2.1.2)
Locus tag: Mmol_0765
Name: null
Funciton: hypothetical protein
Locus tag: Mmol_0766
Name: acnB
Funciton: Aconitate hydratase (EC 4.2.1.3)
sdhR-Mmol_0755-MB2181_04035-sdhC-sdhD-sdhA-sdhB-COG2938-citE-MB2181_04000-fumA-Mmol_0765-acnB -115 7.4 TCTTATGTCTTATATAAGATATAAAA Mmol_0754
Thauera sp. MZ1T
Position: -68
Score: 7.34179
Sequence: TCTTATATCTTATATAAGACACAAGA
Locus tag: Tmz1t_2551
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Tmz1t_2550
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Tmz1t_2549
Name: sdhD
Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: Tmz1t_2548
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Tmz1t_2547
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Tmz1t_2546
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Tmz1t_2545
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: Tmz1t_2544
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Tmz1t_2543
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Tmz1t_2542
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA-odhA-sucB-lpdA -68 7.3 TCTTATATCTTATATAAGACACAAGA Tmz1t_2551