Regulon of SdhR in Chromobacterium violaceum ATCC 12472
| Regulator type: | Transcription factor |
| TF locus tag: | CV1063 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Regulog: | SdhR - Various betaproteobacteria |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By TF family - GntR/Others
- By pathway - Tricarboxylic acid cycle
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: 77
Score: 7 Sequence: TCTTATGTCTTATATAAGACTTATCT
Locus tag: CV1063
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: CV1064
Name: null Funciton: hypothetical protein
Locus tag: CV1065
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: CV1066
Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
Locus tag: CV1067
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: CV1068
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: CV1069
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: CV1070
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: CV1071
Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: CV1072
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: CV1073
Name: null Funciton: hypothetical protein
Locus tag: CV1074
Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
Locus tag: CV1075
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: CV1076
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
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sdhR
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Transcriptional regulator of TCA cycle, GntR family
|
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hypothetical protein
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sdhC
|
Succinate dehydrogenase cytochrome b-556 subunit
|
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sdhD
|
Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
|
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sdhA
|
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
|
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sdhB
|
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
|
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COG2938
|
succinate dehydrogenase iron-sulfur subunit
|
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gltA
|
Citrate synthase (si) (EC 2.3.3.1)
|
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odhA
|
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
|
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|
sucB
|
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
|
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hypothetical protein
|
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lpdA
|
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
|
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sucC
|
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
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sucD
|
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
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Position: -162
Score: 7 Sequence: AGATAAGTCTTATATAAGACATAAGA
Locus tag: CV1062
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) |
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |