Regulon of SdhR in Chromobacterium violaceum ATCC 12472

Properties
Regulator type:	Transcription factor
TF locus tag:	CV1063
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Various betaproteobacteria
Statistics of regulated genes:
- Genes	15
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: 77 Score: 7 Sequence: TCTTATGTCTTATATAAGACTTATCT Locus tag: CV1063 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: CV1064 Name: null Funciton: hypothetical protein Locus tag: CV1065 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: CV1066 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: CV1067 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: CV1068 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: CV1069 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: CV1070 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: CV1071 Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: CV1072 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Locus tag: CV1073 Name: null Funciton: hypothetical protein Locus tag: CV1074 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) Locus tag: CV1075 Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Locus tag: CV1076 Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
	CV1063	sdhR	Transcriptional regulator of TCA cycle, GntR family
	CV1064		hypothetical protein
	CV1065	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	CV1066	sdhD	Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
	CV1067	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	CV1068	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	CV1069	COG2938	succinate dehydrogenase iron-sulfur subunit
	CV1070	gltA	Citrate synthase (si) (EC 2.3.3.1)
	CV1071	odhA	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
	CV1072	sucB	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
	CV1073		hypothetical protein
	CV1074	lpdA	Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
	CV1075	sucC	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
	CV1076	sucD	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Position: -162 Score: 7 Sequence: AGATAAGTCTTATATAAGACATAAGA Locus tag: CV1062 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	CV1062	mdh	Malate dehydrogenase (EC 1.1.1.37)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD