Regulon of SdhR in Thauera sp. MZ1T

Properties
Regulator type:	Transcription factor
TF locus tag:	Tmz1t_2551
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Various betaproteobacteria
Statistics of regulated genes:
- Genes	15
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -68 Score: 7.3 Sequence: TCTTATATCTTATATAAGACACAAGA Locus tag: Tmz1t_2551 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Tmz1t_2550 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Tmz1t_2549 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: Tmz1t_2548 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Tmz1t_2547 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Tmz1t_2546 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Tmz1t_2545 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: Tmz1t_2544 Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: Tmz1t_2543 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Locus tag: Tmz1t_2542 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
	Tmz1t_2551	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Tmz1t_2550	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Tmz1t_2549	sdhD	Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
	Tmz1t_2548	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Tmz1t_2547	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Tmz1t_2546	COG2938	succinate dehydrogenase iron-sulfur subunit
	Tmz1t_2545	gltA	Citrate synthase (si) (EC 2.3.3.1)
	Tmz1t_2544	odhA	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
	Tmz1t_2543	sucB	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
	Tmz1t_2542	lpdA	Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
Position: -339 Score: 5.4 Sequence: TTATATGTCTTTTATAAGACTTGCGG Locus tag: Tmz1t_2007 Name: acnA2/acnD Funciton: Aconitate hydratase (EC 4.2.1.3)
	Tmz1t_2007	acnA2/acnD	Aconitate hydratase (EC 4.2.1.3)
Position: -94 Score: 5.4 Sequence: CCGCAAGTCTTATAAAAGACATATAA Locus tag: Tmz1t_2008 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	Tmz1t_2008	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -168 Score: 7.3 Sequence: TCTTATGTCTTATATAAGACATATTG Locus tag: Tmz1t_1247 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Tmz1t_1247	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -201 Score: 7.3 Sequence: TCTTGTGTCTTATATAAGATATAAGA Locus tag: Tmz1t_2552 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Tmz1t_2553 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
	Tmz1t_2552	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Tmz1t_2553	citE	Citrate lyase beta chain (EC 4.1.3.6)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SdhR in Thauera sp. MZ1T

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --