Regulons of Pseudoalteromonas tunicata D2



Type	Regulator	Effector	Pathway	Genes	Sites
TF	ArgR	Arginine	Arginine degradation; Arginine biosynthesis	15	24
TF	BglR	Beta-glucoside	Beta-glucosides utilization	1	2
TF	BirA	Biotin	Biotin biosynthesis	2	2
TF	Crp	Cyclic 3',5'-AMP	Carbon catabolism	64	97
TF	FabR	Unsaturated acyl-ACP; Unsaturated acyl-CoA	Fatty acid biosynthesis	4	4
TF	FadR	Palmitoyl-CoA; Oleoyl-CoA	Fatty acid degradation	2	2
TF	Fnr	Oxygen	Anaerobic metabolism	3	5
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	14	21
TF	GcvA	Glycine	Glycine metabolism	1	1
TF	GlmR	Glucosamine-6-phosphate	Lipopolysaccharide biosynthesis	1	1
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	4	5
TF	HypR	Proline; 4-hydroxyproline	Proline and 4-hydrohyproline utilization	3	3
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	3	5
TF	LexA	DNA damage	SOS response	6	7
TF	LiuR		Branched-chain amino acid degradation	5	10
TF	MalR	Maltose	Maltodextrin utilization	3	3
TF	MetR	Homocysteine	Methionine biosynthesis	4	5
TF	NagR	N-acetylglucosamine	N-acetylglucosamine utilization	7	8
TF	NorR	Nitric oxide	Nitrosative stress response	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	2	2
TF	PdhR	Pyruvate	Pyruvate metabolism	2	4
TF	PrpR	2-methylcitrate	Methylcitrate utilization	1	2
TF	PsrA	Oleate	Fatty acid degradation	2	2
TF	ScrR	Sucrose	Sucrose utilization	2	2
TF	SO2282		Amino acid efflux	2	2
TF	SoxR	Paraquat	Superoxide stress response	2	2
TF	TreR	Trehalose	Trehalose utilization	3	3
TF	TyrR	Tyrosine; Phenylalanine	Amino acid utilization	9	17

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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