Propagated regulons of Ralstonia eutropha H16
|
Type |
Regulator |
Effector |
Pathway |
Genes |
Sites |
TF |
Dnr |
Nitric oxide |
Denitrification |
2 |
2 |
TF |
FadP |
|
Fatty acid degradation |
15 |
16 |
TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
16 |
16 |
TF |
HexR |
2-keto-3-deoxy-6-phosphogluconate |
Central carbohydrate metabolism |
2 |
4 |
TF |
HrcA |
Heat shock |
Heat shock response |
2 |
2 |
TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
3 |
3 |
TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
1 |
2 |
TF |
LexA |
DNA damage |
SOS response |
9 |
10 |
TF |
LiuQ |
|
Branched-chain amino acid degradation |
2 |
4 |
TF |
LiuR |
|
Branched-chain amino acid degradation |
5 |
9 |
TF |
LldR |
L-lactate |
Lactate utilization |
2 |
2 |
TF |
ModE |
Molybdate |
Molybdenum homeostasis |
1 |
1 |
TF |
NagQ |
N-acetylglucosamine |
N-acetylglucosamine utilization |
1 |
1 |
TF |
NorR |
Nitric oxide |
Nitrosative stress response |
4 |
8 |
TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
3 |
TF |
NsrR |
Nitric oxide |
Nitrosative stress response |
3 |
5 |
TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
4 |
7 |
TF |
PaaR |
Phenylacetyl-CoA |
Phenylacetic acid degradation |
3 |
3 |
TF |
PhnF |
|
Phosphonate utilization |
2 |
2 |
TF |
PsrA |
Oleate |
Fatty acid degradation |
1 |
1 |
TF |
RutR |
Uracil |
Pyrimidine utilization |
1 |
1 |
TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
3 |
3 |