Propagation of PaaR regulog to Ralstonia eutropha H16
| Source regulog: | PaaR - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Phylum: | Betaproteobacteria |
| Propagated regulon: | |
| Target genome | Ralstonia eutropha H16 |
| Orthologous TF(s) | H16_A3526 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -72
Score: 6.2 Sequence: ATTAACCGACCGATCGGTTGGC
Locus tag: H16_A0142
|
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| H16_A0142 | -72 | 6.2 | ATTAACCGACCGATCGGTTGGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaG | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Cupriavidus taiwanensis | RALTA_A0085 | -31 | 6.6 | ATTAACCGACCGATCGGTTGGT |
| Ralstonia eutropha H16 | H16_A0142 | -72 | 6.2 | ATTAACCGACCGATCGGTTGGC |
| Ralstonia eutropha JMP134 | Reut_A0110 | -73 | 6.4 | ATTTACCGACCGGCCGGTTGGT |
|
Position: -90
Score: 5.7 Sequence: GCCGACCGACTGGTCGGTTTAT
Locus tag: H16_A3311
|
||||
| H16_A3311 | -90 | 5.7 | GCCGACCGACTGGTCGGTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaF | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Cupriavidus taiwanensis | RALTA_A2763 | -89 | 5.7 | GCCGACCGACTGGTCGGTTTAT |
| Ralstonia eutropha H16 | H16_A3311 | -90 | 5.7 | GCCGACCGACTGGTCGGTTTAT |
| Ralstonia eutropha JMP134 | Reut_A3015 | -61 | 6.2 | ACCGACCGATCGGTCGGTTAAT |
| Ralstonia metallidurans CH34 | Rmet_3163 | -100 | 5.8 | GCCGACCGACTGGTCGGTTAAT |
| Ralstonia pickettii 12J | Rpic_3115 | -52 | 6.2 | GCCGACCAACCGGTCGGTTAAT |
| Ralstonia solanacearum GMI1000 | RSc2873 | -48 | 6.2 | GCCGACCAACCGGTCGGTTAAT |
|
Position: -79
Score: 5.7 Sequence: ATTGACCGACCGGTCGGCATAT
Locus tag: H16_A3520
|
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| H16_A3520 | -79 | 5.7 | ATTGACCGACCGGTCGGCATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaA | ||||
| Ortholog function: Phenylacetate-CoA oxygenase, PaaA subunit | ||||
| Cupriavidus taiwanensis | RALTA_A2973 | -83 | 6.2 | ATTGACCGACCGGTCGGCTTAT |
| Ralstonia eutropha H16 | H16_A3520 | -79 | 5.7 | ATTGACCGACCGGTCGGCATAT |
| Ralstonia eutropha JMP134 | Reut_A3206 | -95 | 6.2 | ATTGACCGACCGGTCGGCTTAT |
| Ralstonia metallidurans CH34 | Rmet_3369 | -113 | 6.8 | ATTGACCGACCGGTCGGTTTAT |
| Ralstonia pickettii 12J | Rpic_4567 | -96 | 6.3 | ATTGACCGACCGGTCGGACGGT |
| Ralstonia solanacearum GMI1000 | RSp0604 | -97 | 6.3 | ATTGACCGACCGGTCGGACGAT |