Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NrdR regulog to Ralstonia eutropha H16

Reference regulog properties
Source regulog: NrdR - Ralstonia
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha H16
Orthologous TF(s) H16_A2835
Regulated genes 2
Built upon 18 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha H16
Locus tag Position Score Sequence
Position: -240
Score: 5
Sequence: ACACTATATCTAGTAG
Locus tag: H16_A3235
H16_A3235 -240 5 ACACTATATCTAGTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdA
Ortholog function: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ralstonia solanacearum GMI1000 RSc2805 -220 3.7 CCACTATACTTAGTGC
-189 5.3 ACACTAGATATAGTGG
Ralstonia pickettii 12J Rpic_3047 -232 3.6 CCACTATACTTAGCGT
-201 5.2 ACACTAGATGTAGTGG
Ralstonia metallidurans CH34 Rmet_3088 -251 5 CCACTACATCTAGTGG
Ralstonia eutropha JMP134 Reut_A2941 -239 4.9 CCACTATATCTAGTAG
Ralstonia eutropha H16 H16_A3235 -240 5 ACACTATATCTAGTAG
Cupriavidus taiwanensis RALTA_A2686 -251 4.8 CCACTACATCTAGTAG
Position: -67
Score: 5.3
Sequence: AAACTACATATAGTGT
Position: -36
Score: 3.8
Sequence: TCCCCGCATCTAGTGT
Locus tag: PHG240
PHG240 -67 5.3 AAACTACATATAGTGT
-36 3.8 TCCCCGCATCTAGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ralstonia solanacearum GMI1000 RSp0963 -50 4.6 CCACAACATCTAGTGC
-19 3.9 CCACTATATGGAGTAC
Ralstonia pickettii 12J Rpic_4657 -53 4.7 CCACAATATCTAGTGC
-21 5.1 CCACTATATGTAGGGG
Ralstonia pickettii 12J Rpic_2106 -50 4.7 CCACAATATGTAGTGC
-19 3.9 CCACTATATGGAGTAC
Ralstonia metallidurans CH34 Rmet_5139 -67 3.8 ACACCACCTATGGTAT
-36 3.9 ACCCCATATTTTGTGC
Ralstonia eutropha H16 PHG240 -67 5.3 AAACTACATATAGTGT
-36 3.8 TCCCCGCATCTAGTGT
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