Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NsrR regulog to Ralstonia eutropha H16

Reference regulog properties
Source regulog: NsrR - Ralstonia
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha H16
Orthologous TF(s) H16_A3534, PHG235
Regulated genes 3
Built upon 23 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha H16
Locus tag Position Score Sequence
Position: -41
Score: 5.6
Sequence: CATGCATTTAATTTGCATG
Locus tag: H16_A3533
H16_A3533 -41 5.6 CATGCATTTAATTTGCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Ralstonia eutropha H16 H16_A3533 -41 5.6 CATGCATTTAATTTGCATG
Cupriavidus taiwanensis RALTA_A2986 -40 4.6 CATGCATATTTTCTGCATG
Ralstonia metallidurans CH34 Rmet_3382 32 6 CATGCATTTTACATGCATG
Ralstonia eutropha JMP134 Reut_A3219 -41 5.5 CATGCATTTTGTTTGCATG
Ralstonia solanacearum GMI1000 RS01706 -133 4.3 GTGGTATTTAATATGCATG
Ralstonia pickettii 12J Rpic_3609 -32 3.6 GTTGCATATTTCACGCATA
Position: -39
Score: 5.3
Sequence: CTTGCATCCTGGATGCATC
Locus tag: H16_A3534
H16_A3534 -39 5.3 CTTGCATCCTGGATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nsrR
Ortholog function: Nitrite-sensitive transcriptional repressor NsrR
Ralstonia eutropha H16 H16_A3534 -39 5.3 CTTGCATCCTGGATGCATC
Cupriavidus taiwanensis RALTA_A2987 -40 5.5 CTTGCATCCTAGATGCATC
Ralstonia metallidurans CH34 Rmet_3383 -25 5.5 CTTGCATTGGCGATGCACG
Ralstonia eutropha JMP134 Reut_A3220 -39 4.6 CTTGCATTTGAAATGCCGC
Position: -110
Score: 3.7
Sequence: GATACATTTTTAATCTATC
Locus tag: PHG235
PHG235 -110 3.7 GATACATTTTTAATCTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nsrR
Ortholog function: Nitrite-sensitive transcriptional repressor NsrR
Ralstonia solanacearum GMI1000 RS01705 -134 4.3 CATGCATATTAAATACCAC
Ralstonia pickettii 12J Rpic_3608 -218 3.6 TATGCGTGAAATATGCAAC
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