Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Dnr regulog to Ralstonia eutropha H16

Reference regulog properties
Source regulog: Dnr - Ralstonia
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha H16
Orthologous TF(s) PHG262
Regulated genes 2
Built upon 9 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha H16
Locus tag Position Score Sequence
Position: -123
Score: 4.6
Sequence: GTTTGATGCCAGTCAATT
Locus tag: H16_B2277
H16_B2277 -123 4.6 GTTTGATGCCAGTCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirS
Ortholog function: Nitrite reductase NirS (Cytochrome cd1)
Ralstonia metallidurans CH34 Rmet_3172 -118 5.6 CGTTGACTCGTGTCAATC
Ralstonia eutropha JMP134 Reut_B5010 -91 5.2 CGTTGACAACAGTCAACC
Ralstonia eutropha H16 H16_B2277 -123 4.6 GTTTGATGCCAGTCAATT
Cupriavidus taiwanensis RALTA_B2049 -123 4.5 GTTTGATGACAGTCAATC
Position: -110
Score: 5
Sequence: TTTTGATTCGAGTCAAGT
Locus tag: PHG252
PHG252 -110 5 TTTTGATTCGAGTCAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nosZ
Ortholog function: nitrous oxide reductase
Ralstonia solanacearum GMI1000 RSp1368 -126 4.7 GTGTGACGAAAGTCAATT
Ralstonia pickettii 12J Rpic_4059 -136 4.7 GTGTGACGAAAGTCAATT
Ralstonia metallidurans CH34 Rmet_4917 -165 5.1 ACATGACTTATGTCAAGC
Ralstonia eutropha H16 PHG252 -110 5 TTTTGATTCGAGTCAAGT
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