Propagated regulons of Saccharophagus degradans 2-40
| Type | Regulator | Effector | Pathway | Genes | Sites |
|---|---|---|---|---|---|
| TF | AraR | Arabinose | Arabinose utilization | 1 | 1 |
| TF | ArgR | Arginine | Arginine degradation; Arginine biosynthesis | 4 | 4 |
| TF | BglR | Beta-glucoside | Beta-glucosides utilization | 1 | 1 |
| TF | BirA | Biotin | Biotin biosynthesis | 1 | 1 |
| TF | Crp | Cyclic 3',5'-AMP | Carbon catabolism | 30 | 35 |
| TF | Fnr | Oxygen | Anaerobic metabolism | 1 | 1 |
| TF | Fur | Iron ion, (Fe2+) | Iron homeostasis | 7 | 8 |
| TF | HexR | 2-keto-3-deoxy-6-phosphogluconate | Central carbohydrate metabolism | 1 | 1 |
| TF | IscR | Iron-sulfur cluster redox state | Iron-sulfur cluster biogenesis | 2 | 3 |
| TF | LexA | DNA damage | SOS response | 4 | 6 |
| TF | MalR | Maltose | Maltodextrin utilization | 5 | 9 |
| TF | NagR | N-acetylglucosamine | N-acetylglucosamine utilization | 1 | 1 |
| TF | NarP | Nitrite; Nitrate | Nitrate and nitrite respiration | 3 | 3 |
| TF | NtrC | Phosphorylated NtrB, signal histidine kinase | Nitrogen assimilation | 2 | 2 |
| TF | PdhR | Pyruvate | Pyruvate metabolism | 2 | 2 |
| TF | PsrA | Oleate | Fatty acid degradation | 1 | 1 |
| TF | PUR | Purine metabolism | 1 | 1 | |
| TF | TyrR | Tyrosine; Phenylalanine | Amino acid utilization | 1 | 1 |