Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HexR regulog to Saccharophagus degradans 2-40

Reference regulog properties
Source regulog: HexR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Saccharophagus degradans 2-40
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 316 sites [see more]
Predicted regulatory interactions in Saccharophagus degradans 2-40
Locus tag Position Score Sequence
Position: -218
Score: 4.6
Sequence: TTATAACTAAATTACAG
Locus tag: Sde_0635
Sde_0635 -218 4.6 TTATAACTAAATTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Shewanella oneidensis MR-1 SO_1902 -82 5 TGGTAATTAAGTTACAA
Shewanella putrefaciens CN-32 Sputcn32_1723 -82 5 TGGTAATTAAGTTACAA
Shewanella sp W3-18-1 Sputw3181_2302 -82 5 TGGTAATTAAGTTACAA
Shewanella sp ANA-3 Shewana3_1677 -82 5 TGGTAATTAAGTTACAA
Shewanella sp MR-4 Shewmr4_1609 -82 5 TGGTAATTAAGTTACAA
Shewanella sp MR-7 Shewmr7_1684 -82 5 TGGTAATTAAGTTACAA
Shewanella baltica OS155 Sbal_2824 -82 5 TGGTAATTAAGTTACAA
Shewanella frigidimarina NCIMB 400 Sfri_2724 -90 5 TGGTAATTTAGTTACAA
Shewanella amazonensis SB2B Sama_1365 -74 4.2 CTGTAATTCAGTTACCA
Shewanella loihica PV-4 Shew_2561 -172 4.6 TAGTAATTAACTTACCA
Shewanella pealeana ATCC 700345 Spea_2794 -127 4.6 TAGTAATTAAGTTACCA
Shewanella halifaxensis HAW-EB4 Shal_2899 -134 4.6 TAGTAATTAAGTTACCA
Shewanella piezotolerans WP3 swp_3432 -177 4.6 TAGTAATTTAGTTACCA
Shewanella woodyi ATCC 51908 Swoo_3220 -239 4.6 TAGTAATTAACTTACCA