Propagation of AraR regulog to Saccharophagus degradans 2-40
| Source regulog: | AraR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Saccharophagus degradans 2-40 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -116
Score: 5.5 Sequence: TGATATTATTGTATTACTA
Locus tag: Sde_3317
|
||||
| Sde_3317 | -116 | 5.5 | TGATATTATTGTATTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: abnA | ||||
| Ortholog function: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_2047 | -88 | 5.4 | CAGTAGTATTGTATTACAT |
| Shewanella sp W3-18-1 | Sputw3181_1965 | -88 | 5.4 | CAGTAGTATTGTATTACAT |
| Shewanella sp ANA-3 | Shewana3_2086 | -85 | 5.8 | CAGTAGTATTGTATTACTT |
| Shewanella sp MR-4 | Shewmr4_1999 | -85 | 5.8 | CAGTAGTATTGTATTACTT |
| Shewanella sp MR-7 | Shewmr7_1976 | -85 | 5.8 | CAGTAGTATTGTATTACTT |