Profile of regulator AraR in Shewanellaceae
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraR - Shewanellaceae |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - GntR/Others
- By effector - Arabinose
- By pathway - Arabinose utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Shewanella putrefaciens CN-32 | |||||
| Sputcn32_2048 | omp(Ara) | -503 | 5.4 | ATGTAATACAATACTACTG | |
| Sputcn32_2047 | abnA | -88 | 5.4 | CAGTAGTATTGTATTACAT | |
| Sputcn32_2063 | arb43 | -45 | 6.1 | TGGTATTACTATAATACTA | |
| Sputcn32_2062 | araC | -178 | 6.1 | TAGTATTATAGTAATACCA | |
| Sputcn32_2068 | araB | -80 | 6.1 | TAGTAGTATTGTAGTACTA | |
| Sputcn32_2068 | araB | -107 | 5.3 | AAATAATATTGTAATACCA | |
| Shewanella sp W3-18-1 | |||||
| Sputw3181_1964 | omp(Ara) | -504 | 5.4 | ATGTAATACAATACTACTG | |
| Sputw3181_1965 | abnA | -88 | 5.4 | CAGTAGTATTGTATTACAT | |
| Sputw3181_1949 | arb43 | -45 | 6.1 | TGGTATTACTATAATACTA | |
| Sputw3181_1950 | araC | -178 | 6.1 | TAGTATTATAGTAATACCA | |
| Sputw3181_1944 | araB | -80 | 6.1 | TAGTAGTATTGTAGTACTA | |
| Sputw3181_1944 | araB | -107 | 5.3 | AAATAATATTGTAATACCA | |
| Shewanella sp ANA-3 | |||||
| Shewana3_2085 | omp(Ara) | -520 | 5.8 | AAGTAATACAATACTACTG | |
| Shewana3_2086 | abnA | -85 | 5.8 | CAGTAGTATTGTATTACTT | |
| Shewana3_2069 | arb43 | -45 | 6 | TGGTATTACTATAATACCA | |
| Shewana3_2070 | araC | -123 | 6 | TGGTATTATAGTAATACCA | |
| Shewana3_2064 | araB | -81 | 6.1 | TAGTAATATTGTAGTACTA | |
| Shewana3_2064 | araB | -108 | 4.8 | AAATCATATTGTATTACTA | |
| Shewanella sp MR-4 | |||||
| Shewmr4_1998 | omp(Ara) | -521 | 5.8 | AAGTAATACAATACTACTG | |
| Shewmr4_1999 | abnA | -85 | 5.8 | CAGTAGTATTGTATTACTT | |
| Shewmr4_1982 | arb43 | -45 | 6 | TGGTATTACTATAATACCA | |
| Shewmr4_1983 | araC | -150 | 6 | TGGTATTATAGTAATACCA | |
| Shewmr4_1977 | araB | -81 | 6.1 | TAGTAATATTGTAGTACTA | |
| Shewmr4_1977 | araB | -108 | 4.8 | AAATCATATTGTATTACTA | |
| Shewanella sp MR-7 | |||||
| Shewmr7_1977 | omp(Ara) | -521 | 5.8 | AAGTAATACAATACTACTG | |
| Shewmr7_1976 | abnA | -85 | 5.8 | CAGTAGTATTGTATTACTT | |
| Shewmr7_1992 | arb43 | -45 | 6 | TGGTATTACTATAATACCA | |
| Shewmr7_1991 | araC | -150 | 6 | TGGTATTATAGTAATACCA | |
| Shewmr7_1997 | araB | -81 | 6.1 | TAGTAATATTGTAGTACTA | |
| Shewmr7_1997 | araB | -108 | 4.8 | AAATCATATTGTATTACTA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |