Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NarP regulog to Saccharophagus degradans 2-40

Reference regulog properties
Source regulog: NarP - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Phylum: Proteobacteria
Propagated regulon:
Target genome Saccharophagus degradans 2-40
Orthologous TF(s) No orthologous TFs found
Regulated genes 3
Built upon 249 sites [see more]
Predicted regulatory interactions in Saccharophagus degradans 2-40
Locus tag Position Score Sequence
Position: -282
Score: 3.8
Locus tag: Sde_0755
Sde_0755 -282 3.8 TACCCCTTGCGGAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: Cyclic AMP receptor protein, transcriptional regulator Crp
Shewanella oneidensis MR-1 SO0624 -217 4.2 TAACTCTACAGAGTTA
Shewanella putrefaciens CN-32 Sputcn32_0652 -217 3.7 TAACTCGACAGAGTTA
Shewanella sp W3-18-1 Sputw3181_3522 -217 3.7 TAACTCGACAGAGTTA
Shewanella sp ANA-3 Shewana3_0617 -217 4.2 TAACTCTACAGAGTTA
Shewanella sp MR-4 Shewmr4_0618 -217 4.2 TAACTCTACAGAGTTA
Shewanella sp MR-7 Shewmr7_3412 -217 4.2 TAACTCTACAGAGTTA
Shewanella baltica OS155 Sbal_0578 -217 3.7 TAACTCGACAGAGTTA