Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NarP in Shewanellaceae

Properties
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO3058 SO3058 -77 4.3 TACCTCCTTTTAGGTG
SO2805 nnrS -78 4.2 TACTCATAAGGGGATA
SO3980 nrfA -95 5.2 TACCCCCTAAGAGGTA
SO4520 SO4520 -95 4.4 TACTCCATTCGAGGTA
SO4452 moaA -167 4.8 TACCTGTTTAGGGGTA
SO3981 narQ -199 5.1 TACCTCTTAGGGGGTA
SO0398 frdA -19 4.2 TACCCGTTAAGGAGCA
SO0970 fccA -43 4.5 TATCCCTTATTAAGTA
SO1659 mtrF -80 4.9 TACCACTTTATAAGTA
SO0624 crp -217 4.2 TAACTCTACAGAGTTA
SO3140.1 SO3141 -205 4.3 TACTTCCAAAGATATA
SO1673 ompW -135 4.6 TACCTAAAAATAAGTA
SO1490 adhB -68 5.1 TACCCCTTAATTGGTA
SO4062 psrA -179 5 TACCCCTTTAGGAATA
SO3896 omp35 -255 5.2 TACCTCTTTAGTGGTA
SO1779 omcA -179 4.8 TACCTCAAAAGAAATA
SO0849 napD -119 4.9 TACCTCTTGTGAGGTA
SO3059 SO3059 -104 3.9 CACCTAAAAGGAGGTA
SO1778 mtrC -204 5.2 TACCTCTTTAGAAATA
Shewanella putrefaciens CN-32
Sputcn32_2432 SO3058 -77 4.5 TACCTCTTTTTAGGTG
Sputcn32_0685 nrfA -95 5.2 TACCTCCTAAGAGGTA
Sputcn32_0684 narQ -162 5.2 TACCTCTTAGGAGGTA
Sputcn32_3147 napD -116 4.9 TACCTCTTGTGAGGTA
Sputcn32_0905 fccA -42 4.7 TAACCCTTATTAAGTA
Sputcn32_1392 ompW -242 4.1 TAACCCTTACTAGGTG
Sputcn32_1392 ompW -132 4.6 TACCTATAAGTGGGTA
Sputcn32_3576 dnrN -137 4.6 TACTCCCTAAGGAATA
Sputcn32_0781 omp35 -256 5.1 TACCTCTTAAGTAGTA
Sputcn32_0389 moaA -134 4.8 TACCTGTTTAGGGGTA
Sputcn32_1901 napE2 -145 4.4 TACCGATTTGGAGGTA
Sputcn32_1478 mtrC -204 5.2 TACCTCTTTAGAAATA
Sputcn32_2507 SO3141 -219 4.9 TACCTCTAAAGTAATA
Sputcn32_1479 omcA -180 5.1 TACCCCTAAAGAAATA
Sputcn32_1380 mtrF -77 4.9 TACCACTTTATAAGTA
Sputcn32_0652 crp -217 3.7 TAACTCGACAGAGTTA
Sputcn32_2433 SO3059 -104 4.2 CACCTAAAAAGAGGTA
Shewanella sp W3-18-1
Sputw3181_3486 nrfA -95 5.2 TACCTCCTAAGAGGTA
Sputw3181_3487 narQ -162 5.2 TACCTCTTAGGAGGTA
Sputw3181_0796 napD -116 4.9 TACCTCTTGTGAGGTA
Sputw3181_3267 fccA -42 4.7 TAACCCTTATTAAGTA
Sputw3181_2709 ompW -132 4.6 TACCTATAAGTGGGTA
Sputw3181_2709 ompW -242 4.2 TAACCCTTATTAGGTG
Sputw3181_3394 omp35 -256 5.1 TACCTCTTAAGTAGTA
Sputw3181_2721 mtrF -77 4.9 TACCACTTTATAAGTA
Sputw3181_1576 SO3058 -77 4.5 TACCTCTTTTTAGGTG
Sputw3181_2622 omcA -180 5.1 TACCCCTAAAGAAATA
Sputw3181_0243 moaA -134 4.8 TACCTGTTTAGGGGTA
Sputw3181_2107 napE2 -145 4.4 TACCGATTTGGAGGTA
Sputw3181_3715 dnrN -137 4.6 TACTCCCTAAGGAATA
Sputw3181_3522 crp -217 3.7 TAACTCGACAGAGTTA
Sputw3181_1575 SO3059 -104 4.2 CACCTAAAAAGAGGTA
Sputw3181_2623 mtrC -204 5.2 TACCTCTTTAGAAATA
Sputw3181_1501 SO3141 -219 4.4 TATCTCTAAAGTAATA
Shewanella sp ANA-3
Shewana3_0658 nrfA -77 5.2 TACCCCCTAAGAGGTA
Shewana3_0657 narQ -163 5.1 TACCTCTTAGGGGGTA
Shewana3_3318 fccA -43 4.7 TAACCCTTATTAAGTA
Shewana3_3926 SO4520 -95 4.4 TACTCCATACGAGGTA
Shewana3_0403 frdA -19 4.2 TACCCGTTAAGGAGCA
Shewana3_2787 mtrF -77 4.9 TACCACTTTATAAGTA
Shewana3_2587 nnrS -77 4 TACTCAAAAGGAGATA
Shewana3_0733 omp35 -255 5.1 TACCTCTTTAGTAGTA
Shewana3_0617 crp -217 4.2 TAACTCTACAGAGTTA
Shewana3_1409 SO3141 -216 4.6 TACCTCCAAAGATATA
Shewana3_2675 omcA -179 5.1 TACCTCTAAAGAAATA
Shewana3_0274 moaA -134 4.8 TACCTGTTTAGGGGTA
Shewana3_3619 psrA -181 5.1 TACCCCTTTAGGGATA
Shewana3_2938 adhB -68 5.1 TACCCCTTAATTGGTA
Shewana3_1489 SO3058 -77 4.5 TACCTCTTTTTAGGTG
Shewana3_0397 dnrN -127 4.4 TACTCACTTAGAGATA
Shewana3_2775 ompW -132 4.8 TACCTCAAAATAAGTA
Shewana3_1488 SO3059 -104 4.2 CACCTAAAAAGAGGTA
Shewana3_2676 mtrC -203 5.2 TACCTCTTTAGAAATA
Shewana3_3429 napD -118 4.8 TACCTCTTGCGAGGTA
Shewanella sp MR-4
Shewmr4_0659 nrfA -77 5.2 TACCCCCTAAGAGGTA
Shewmr4_0658 narQ -164 5.1 TACCTCTTAGGGGGTA
Shewmr4_3228 omp35 -255 5.1 TACCTCTTTAGTAGTA
Shewmr4_0808 fccA -43 4.7 TAACCCTTATTAAGTA
Shewmr4_3730 SO4520 -95 4.4 TACTCCATACGAGGTA
Shewmr4_1356 SO3141 -215 4.6 TACCTCCAAAGATATA
Shewmr4_0404 frdA -19 4.2 TACCCGTTAAGGAGCA
Shewmr4_2762 adhB -68 5.1 TACCCCTTAATTGGTA
Shewmr4_2509 omcA -179 5.1 TACCCCTAAAGAAATA
Shewmr4_0618 crp -217 4.2 TAACTCTACAGAGTTA
Shewmr4_2226 narG -261 4.3 TACCTCTTAATAGTTC
Shewmr4_1840 napE2 -137 4.4 TACCGATTTGGAGGTA
Shewmr4_2225 narK -128 4.4 CACCCATTAAGGAGTA
Shewmr4_2225 narK -238 4.5 TACCCCCTTGTGGATA
Shewmr4_0273 moaA -134 4.6 TACCTGTTTGGGGGTA
Shewmr4_0398 dnrN -127 4.7 TACTCCCTTAGAGATA
Shewmr4_2601 ompW -132 4.8 TACCTCAAAATAAGTA
Shewmr4_2510 mtrC -203 5.2 TACCTCTTTAGAAATA
Shewmr4_2613 mtrF -78 4.9 TACCACTTTATAAGTA
Shewmr4_2425 nnrS -77 4.4 TACTCATAAGGAGATA
Shewmr4_0705 napD -118 4.9 TACCTCTTGTGAGGTA
Shewanella sp MR-7
Shewmr7_3317 napD -118 4.9 TACCTCTTGTGAGGTA
Shewmr7_3363 nrfA -77 5.2 TACCCCCTAAGAGGTA
Shewmr7_3364 narQ -164 5.1 TACCTCTTAGGGGGTA
Shewmr7_0761 omp35 -255 5.1 TACCTCTTTAGTAGTA
Shewmr7_3215 fccA -43 4.7 TAACCCTTATTAAGTA
Shewmr7_3801 SO4520 -95 4.4 TACTCCATACGAGGTA
Shewmr7_3412 crp -217 4.2 TAACTCTACAGAGTTA
Shewmr7_2137 napE2 -137 4.4 TACCGATTTGGAGGTA
Shewmr7_1421 SO3141 -215 4.6 TACCTCCAAAGATATA
Shewmr7_3748 moaA -134 4.6 TACCTGTTTGGGGGTA
Shewmr7_2302 narG -261 4.3 TACCTCTTAATAGTTC
Shewmr7_2301 narK -128 4.4 CACCCATTAAGGAGTA
Shewmr7_2301 narK -238 4.6 TACCCCCTTGTAGATA
Shewmr7_2840 adhB -68 5.1 TACCCCTTAATTGGTA
Shewmr7_2577 omcA -179 5.1 TACCCCTAAAGAAATA
Shewmr7_3621 frdA -19 4.2 TACCCGTTAAGGAGCA
Shewmr7_3627 dnrN -127 4.7 TACTCCCTTAGAGATA
Shewmr7_2680 mtrF -78 4.9 TACCACTTTATAAGTA
Shewmr7_2668 ompW -132 4.8 TACCTCAAAATAAGTA
Shewmr7_2578 mtrC -203 5.2 TACCTCTTTAGAAATA
Shewmr7_2495 nnrS -77 4.4 TACTCATAAGGAGATA
Shewanella baltica OS155
Sbal_3510 napD -119 4.9 TACCTCTTGTGAGGTA
Sbal_0794 nrfA -95 5.2 TACCCCCTAAGAGGTA
Sbal_1490 ompW -132 4.5 TACCTATAAGTGAGTA
Sbal_0793 narQ -146 5.1 TACCTCTTAGGGGGTA
Sbal_3570 omp35 -256 4.9 TACCACTTAAGTAGTA
Sbal_0859 fccA -42 4.7 TAACCCTTATTAAGTA
Sbal_0578 crp -217 3.7 TAACTCGACAGAGTTA
Sbal_1590 omcA -180 4.8 TACTCCTAAAGAAATA
Sbal_1321 adhB -72 4.8 TACCTCCAAATTGGTA
Sbal_1478 mtrF -78 4.7 TACCACTTTGTAAGTA
Sbal_2843 SO3141 -217 4.4 TACCTCCAAAGTATTA
Sbal_0284 moaA -134 4.8 TACCTGTTTAGGGGTA
Sbal_1908 napE2 -144 4.6 TACCAATTTGGAGGTA
Sbal_3989 dnrN -136 5 TACTCCTTAAGAGATA
Sbal_1589 mtrC -204 5.2 TACCTCTTTAGAAATA
Sbal_1680 nnrS -82 4.2 TACTCATATCGAGATA
Shewanella frigidimarina NCIMB 400
Sfri_0622 nrfA -111 5 TACCCCATAAGGGGTA
Sfri_3897 Sfri_3897 -123 3.9 TACCTACAATTGATTA
Sfri_0621 narQ -188 5.1 TACCCCTTATGGGGTA
Sfri_0553 napA -111 4.5 TACCCATTCTGAGGTA
Sfri_0076 SO4520 -106 4.5 TATCTCTAAAGTGATA
Sfri_3690 fccA -313 4.6 TACCTCTTTATAACTA
Sfri_0503 omp35 -243 4.3 CATCCCTAAAGAGGTA
Sfri_1334 ompW -132 5 TACCTCTATAGTAGTA
Sfri_1505 nasA -203 5.3 TACCTCTTTATAGGTA
Sfri_3686 dmsE -243 4.6 TACCTATATGTAGGTA
Sfri_2555 napE2 -119 4.3 TACCAATTTGTGAGTA
Sfri_0913 mtrF -191 4.9 TACCTCTTTAGGGTTA
Sfri_2637 mtrC -178 4.9 TACCTCTTTATTAATA
Sfri_2636 omcA -150 4.7 TACCCATAAAGGAATA
Shewanella amazonensis SB2B
Sama_0648 nrfA -101 5 TACCACTTAATGGGTA
Sama_0647 narQ -160 4.9 TACCCATTAAGTGGTA
Sama_0611 fccA -35 5.2 TACCTCTTTATAAGTA
Sama_2228 mtrF -77 4.5 TACCACTTTATATATA
Sama_3524 moaA -127 4.2 TACACGTTTAGAGGTA
Sama_0544 omp35 -262 4.9 TACCCATTTATGGGTA
Sama_2990 SO3141 -212 4.4 TATCTCCAAAGTGGTA
Sama_2753 nhaD -145 4.5 TACCACCTTGTAGGTA
Sama_3177 psrA -331 4.8 TACCTCTTTAGGGGTG
Sama_1208 mtrC -192 4.9 TACCCCTTTTGAAATA
Sama_1209 omcA -182 5.1 TACCCCTAAAGAAATA
Sama_2982 napD -105 4.8 TACCTCCTAGTGGGTA
Sama_1620 napE2 -106 4.5 TACCGATTTAGGGGTA
Sama_1371 ompW -134 4.5 TACCCCAAAGTGGGTA
Sama_3236 dnrN -123 4 TACTCCTTTTGGCATA
Sama_1208 mtrC -133 5 TACCCCCTATGAGGTA
Shewanella loihica PV-4
Shew_3205 napD -123 4.9 TACCTCTCAAGAGGTA
Shew_0073 SO4520 -106 4.3 TATTCCTTAAGTGATA
Shew_3112 fccA -268 4.5 TACCTCTTTGTGATTA
Shew_0843 narQ -161 5.1 TACCCCTTATGGGGTA
Shew_3260 omp35 -261 4.9 TACCCCTTTGGGAGTA
Shew_1768 napE2 -153 4.5 TACCGATTTAGGGGTA
Shew_2524 omcA -214 5.1 TACCTCTAAAGAAATA
Shew_2655 Shew_2655 -166 5 TACCACTTTAGAGATA
Shew_2281 SO3058 -107 3.8 CCCCTCTTTTTAGGTA
Shew_2655 Shew_2655 -152 4.3 TACCTCTAATTCAGTA
Shew_0699 nhaD -156 4.8 TACCACTTTGTAGGTA
Shew_0844 nrfA -102 5 TACCCCATAAGGGGTA
Shew_2580 SO3141 -248 5 TACCTCCAAAGAGATA
Shew_0504 nnrS2 -177 4.4 TGCCTATAAAGAGGTA
Shew_2525 mtrC -193 5.2 TACCCCTTTAGAAATA
Shew_0918 mtrF -21 4.8 TACCTATAAAGGGATA
Shewanella pealeana ATCC 700345
Spea_3939 Sfri_3897 -158 4.6 TACCTCCAAAGTAATA
Spea_0624 napD -118 4.9 TACCCCTTGTGAGGTA
Spea_0722 fccA -101 4.5 TACCTCAAAGTGAGTA
Spea_2787 ompW -133 3.9 TATCTCGAAGTGGGTA
Spea_1227 nnrS2 -155 4.4 TACTCATTAAGATATA
Spea_3600 Spea_3600 -109 4.6 TATCTCTTTAGTAGTA
Spea_2697 omcA -184 5.1 TACCCCTAAAGAAATA
Spea_0830 narQ -157 5 TACCTCCTATGAGGTA
Spea_3233 Shew_2655 -165 4.5 TACCTACTTGTAGGTA
Spea_3233 Shew_2655 -151 4.4 TATCCCTAAATTAGTA
Spea_0589 omp35 -260 4.6 CACCTCTTTATAGATA
Spea_0831 nrfA -101 4.9 TACCTCATAGGAGGTA
Spea_2698 mtrC -195 5.2 TACCTCTTTAGAAATA
Shewanella halifaxensis HAW-EB4
Shal_0331 Sfri_3897 -157 4.1 CACTTCTAAAGTAGTA
Shal_0176 narK -237 3.9 TAATACCTAGGTGGTA
Shal_1261 nnrS2 -153 4.6 TACCTATAAAGATATA
Shal_0886 nrfA -98 4.7 TACCTCGTTGGAGGTA
Shal_0776 fccA -101 4.3 TACCTCGAATTGAGTA
Shal_0716 napD -119 4.7 TACCCCTTGCGAGGTA
Shal_2928 dmsE -69 4.3 TACCCCCTTCGATATA
Shal_0676 omp35 -260 4.8 TACTCCTTTAGGGATA
Shal_3305 Shew_2655 -165 4.3 TACCTATTTGTGTGTA
Shal_3305 Shew_2655 -151 4.6 TACCTCTAAATCGGTA
Shal_0885 narQ -159 4.7 TACCTCCAACGAGGTA
Shal_3447 SO3058 -105 4 TATCGCTAATTAGGTA
Shal_2784 mtrC -194 5.2 TACCTCTTTAGAAATA
Shal_2783 omcA -182 5.1 TACCCCTAAAGAAATA
Shal_3689 Spea_3600 -109 4.7 TATCTCTTTAGTGGTA
Shewanella piezotolerans WP3
swp_0614 swp_0614 -293 5.2 TACCTCTTAATGGGTA
swp_0220 Sfri_3897 -226 4.7 TACTCCTAAAGTAGTA
swp_3958 nrfA -96 5 TACCCCATAAGGGGTA
swp_3960 narQ -263 5.1 TACCCCTTATGGGGTA
swp_4456 napD -111 4.9 TACCCCTTGTGAGGTA
swp_3395 ompW -136 4.6 TATCTCTAAATGGGTA
swp_2922 nasA -197 4.3 TACCTCTTTGTGAGTG
swp_3404 nnrS2 -158 4.5 TACCTACAAAGGAATA
swp_1238 psrA -236 3.9 TACCACAATAGACATA
swp_0694 Spea_3600 -110 4.6 TATCTCTTTAGTAGTA
swp_3277 omcA -184 5.1 TACCCCTAAAGAAATA
swp_1107 Shew_2655 -151 4.9 TACCTCTAAATTAGTA
swp_1107 Shew_2655 -165 5 TACCCATTTATAGGTA
swp_3461 dmsE -34 4.3 TACCCCCTTCGATATA
swp_4514 omp35 -260 5.1 TACCCCTTTAGGGATA
swp_3278 mtrC -193 5.1 TACCTCTTTATAAATA
swp_0896 mtrF -18 4.8 TACCTATAAAGGGATA
Shewanella sediminis HAW-EB3
Ssed_0273 Sfri_3897 -159 4.7 TACCTCTAAAGTTGTA
Ssed_3185 Shew_2655 -162 5 TACCTCCTTATAAGTA
Ssed_1953 narK -235 4.1 TAGTTCTTTAGTAGTA
Ssed_1525 mtrC -205 5 TACCCCTTTATAAATA
Ssed_3956 napD -132 4.7 TACCTCTTGTTGGGTA
Ssed_1469 ompW -133 4 TATCTATAACTGGGTA
Ssed_3744 swp_0614 -173 5.2 TACCTCTTTAGGGATA
Ssed_0931 nrfA -100 5 TACCCCCTTAGGGGTA
Ssed_4009 omp35 -263 4.1 TACTTCGTTCTAGGTA
Ssed_1912 napD2 -192 4.1 TATCTCCTTACGAGTA
Ssed_3185 Shew_2655 -176 4.6 TACTACTTTAGGAGTA
Ssed_1526 omcA -209 5.1 TACCCCTAAAGAAATA
Ssed_1912 napD2 -218 4.4 TACCAAGTTAGAGGTA
Ssed_0930 narQ -161 4.9 TACCCCTAAGGGGGTA
Ssed_0346 SO3059 -230 4.1 TAACGCTTTTTAAGTA
Ssed_0742 Spea_3600 -109 4.7 TATCCCTTTATGGGTA
Shewanella woodyi ATCC 51908
Swoo_4806 SO4520 -107 4.8 TAACTCTAAAGTGGTA
Swoo_4109 napD -124 5 TACCCCTTACTAGGTA
Swoo_3207 ompW -133 4.1 TATCTATAAGTGGGTA
Swoo_4517 SO3141 -161 5.1 TACCTCTTTAGTAGTA
Swoo_3303 Shew_2655 -164 5 TACCACTTTATAGGTA
Swoo_3303 Shew_2655 -150 4.8 TACCACTTAATTAGTA
Swoo_0972 nrfA -100 5 TACCTCATAAGGGGTA
Swoo_2682 napE2 -157 4.4 TACCAAGTTAGAGGTA
Swoo_3124 omcA -209 5.1 TACCCCTAAAGAAATA
Swoo_0971 narQ -160 5.2 TACCCCTTATGAGGTA
Swoo_3125 mtrC -218 5 TACCCCTTTATAAATA
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