Regulons of Azotobacter vinelandii AvOP

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	3	2
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	2	2
TF	CueR	Copper ion, (Cu+)	Copper resistance	2	1
TF	FruR	Fructose-1-phosphate; Fructose-1,6-diphosphate	Fructose utilization	2	2
TF	GcvR	Glycine	Glycine metabolism	1	2
TF	GguR		Glucuronate utilization; Glucarate utilization; Galacturonate utilization; Galactarate utilization	4	3
TF	GlcC	Glycolate	Glycolate utilization	2	4
TF	GntR	Gluconate	Gluconate utilization	4	5
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	11	5
TF	HexR1	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	4	3
TF	HmgQ	4-hydroxyphenylpyruvate	Tyrosine degradation	2	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	2	1
TF	LexA	DNA damage	SOS response	9	6
TF	LiuR		Branched-chain amino acid degradation	1	2
TF	LldR	L-lactate	Lactate utilization	2	4
TF	MetR	Homocysteine	Methionine biosynthesis	4	2
TF	ModE	Molybdate	Molybdenum homeostasis	3	2
TF	NmlR	Diamide	Carbonyl stress response	1	1
TF	NorR	Nitric oxide	Nitrosative stress response	2	6
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	3
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	5
TF	PFL_0254		Sugar utilization	1	1
TF	PP2948			1	1
TF	PhrR	Blue light; Adenosylcobalamin	Light-dependent DNA repair	4	3
TF	PrpR	2-methylcitrate	Methylcitrate utilization	2	2
TF	PsrA	Oleate	Fatty acid degradation	12	1
TF	PtxS	2-keto-D-gluconate	2-ketogluconate utilization	3	3
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	1	1
TF	ScrR	Sucrose	Sucrose utilization	3	2
TF	SdaR		Glucarate utilization; Galactarate utilization	2	1
TF	SdaR	D-glycerate	Glycerate utilization	2	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	8	7
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	2	1
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	S15		Ribosome biogenesis	1	1
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	2	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1
RNA	yybP-ykoY			1	1

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Azotobacter vinelandii AvOP

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --