Regulon of GlcC in Azotobacter vinelandii AvOP

Properties
Regulator type:	Transcription factor
TF locus tag:	Avin_43340
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Glycolate utilization
Effector:	Glycolate
Regulog:	GlcC - Pseudomonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - GlcC
By TF family - GntR/Others
By effector - Glycolate
By pathway - Glycolate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -128 Score: 5.8 Sequence: AGCTGGTCATACCAGTT Position: -30 Score: 4.8 Sequence: TCATGGTCCTACCAGTT Locus tag: Avin_43340 Name: glcC Funciton: Glycolate utilization operon transcriptional activator GlcC
	Avin_43340	glcC	Glycolate utilization operon transcriptional activator GlcC
Position: -255 Score: 4.4 Sequence: AACTGGTAGGACCATGA Position: -157 Score: 5.3 Sequence: AACTGGTATGACCAGCT Locus tag: Avin_43330 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Avin_43320 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: Avin_43310 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: Avin_43300 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon Locus tag: Avin_43290 Name: glcB Funciton: Malate synthase G (EC 2.3.3.9)
	Avin_43330	glcD	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
	Avin_43320	glcE	Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
	Avin_43310	glcF	Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
	Avin_43300	glcG	Hypothetical protein GlcG in glycolate utilization operon
	Avin_43290	glcB	Malate synthase G (EC 2.3.3.9)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD