Regulon of PhrR in Azotobacter vinelandii AvOP

Properties
Regulator type:	Transcription factor
TF locus tag:	Avin_41410
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Light-dependent DNA repair
Effector:	Blue light; Adenosylcobalamin
Regulog:	PhrR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 43 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - PhrR
By TF family - MerR
By effector - Blue light
By effector - Adenosylcobalamin
By pathway - Light-dependent DNA repair

Regulated operons
	Locus Tag	Name	Function
Position: -94 Score: 5.7 Sequence: TGTACAAACTGTTGATCATGTACA Position: -43 Score: 5 Sequence: TATACAAATCATGAAAGCTGTACA Locus tag: Avin_41400 Name: COG3272 Funciton: COG1683: Uncharacterized conserved protein / COG3272: Hypothetical protein YbgA Locus tag: Avin_41410 Name: phrR Funciton: Transcriptional regulator, MerR family, associated with photolyase Locus tag: Avin_41430 Name: phr Funciton: Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
	Avin_41400	COG3272	COG1683: Uncharacterized conserved protein / COG3272: Hypothetical protein YbgA
	Avin_41410	phrR	Transcriptional regulator, MerR family, associated with photolyase
	Avin_41430	phr	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
Position: -78 Score: 4.4 Sequence: TGTACAAAGCGGGACACTGCTATA Locus tag: Avin_10270 Name: folM Funciton: FolM Alternative dihydrofolate reductase 1 Locus tag: Avin_10260 Name: folB Funciton: Dihydroneopterin triphosphate epimerase Locus tag: Avin_10250 Name: PF06844 Funciton: protein of unknown function DUF1244 Locus tag: Avin_10240 Name: PF08888 Funciton: HopJ type III effector protein
	Avin_10270	folM	FolM Alternative dihydrofolate reductase 1
	Avin_10260	folB	Dihydroneopterin triphosphate epimerase
	Avin_10250	PF06844	protein of unknown function DUF1244
	Avin_10240	PF08888	HopJ type III effector protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD