Regulon of NtrC in Azotobacter vinelandii AvOP

Properties
Regulator type:	Transcription factor
TF locus tag:	Avin_45900
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Pseudomonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -296 Score: 4.9 Sequence: CGCACGGTTTTCGTGCG Locus tag: Avin_47790 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Avin_47780 Name: amtB Funciton: Ammonium transporter
	Avin_47790	glnK	Nitrogen regulatory protein P-II
	Avin_47780	amtB	Ammonium transporter
Position: -232 Score: 4.1 Sequence: CGCACCAAAATGAAACA Position: -100 Score: 4.1 Sequence: TGCTCCCTTGTGGCGCG Locus tag: Avin_45850 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Avin_45850	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -298 Score: 4.6 Sequence: TGCATTTTTTTGGTGCG Locus tag: Avin_37690 Name: ybdK Funciton: Carboxylate-amine ligase Locus tag: Avin_37680 Name: PF04168 Funciton: Conserved hypothetical protein
	Avin_37690	ybdK	Carboxylate-amine ligase
	Avin_37680	PF04168	Conserved hypothetical protein
Position: -179 Score: 4.2 Sequence: CGCCCTGTTTTGGGGCG Locus tag: Avin_45890 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Avin_45900 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Avin_45890	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Avin_45900	ntrC	Nitrogen regulation protein NR(I), Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD