Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Psychromonas ingrahamii 37

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 8 9
TF BirA Biotin Biotin biosynthesis 2 2
TF CueR Copper ion, (Cu+) Copper resistance 3 2
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 6 2
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 1 1
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Fructose utilization 2 4
TF Fur Iron ion, (Fe2+) Iron homeostasis 5 6
TF GabR Gamma-aminobutyric acid Gamma-aminobutyrate utilization 1 1
TF GntR Gluconate Gluconate utilization 3 5
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 18 13
TF HutC cis-Urocanic acid Histidine utilization 3 4
TF HypR Proline; 4-hydroxyproline Proline and 4-hydrohyproline utilization 3 2
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 3
TF LexA DNA damage SOS response 13 12
TF MerR Mercury ion, (Hg2+) Mercury resistance 1 1
TF MetJ S-adenosylmethionine Methionine metabolism; Methionine biosynthesis 9 4
TF MetR Homocysteine Methionine biosynthesis 2 3
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 5 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 3 4
TF NsrR Nitric oxide Nitrosative stress response 2 3
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 3
TF PdhR Pyruvate Pyruvate metabolism 1 2
TF PhnF Phosphonate utilization 1 1
TF PhnR Phosphonate utilization; 2-aminoethylphosphonate utilization 2 4
TF PrpR 2-methylcitrate Methylcitrate utilization 1 2
TF RbsR Ribose Ribose utilization 1 1
TF SgaR Ascorbate-6-phosphate Ascorbate utilization 2 4
TF TauR Taurine Taurine utilization 2 2
TF TreR Trehalose-6-phosphate Trehalose utilization 1 2
TF UxuR Glucuronate Glucuronate utilization 4 9
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 2
RNA MOCO_RNA_motif Molybdenum Molybdopterin biosynthesis 2 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 4 3
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