Regulon of PhnR in Psychromonas ingrahamii 37
| Regulator type: | Transcription factor |
| TF locus tag: | Ping_2743 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | |
| Regulog: | PhnR - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - PhnR
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -227
Score: 4.6 Sequence: TAATTGGTATGTACCAGTTT
Position: -39
Score: 5.9 Sequence: ATTCTGGTCTACACCAAAAA
Locus tag: Ping_2747
Name: phnW Funciton: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
Locus tag: Ping_2748
Name: COG0160 Funciton: 4-aminobutyrate aminotransferase and related aminotransferases
Locus tag: Ping_2749
Name: phnX Funciton: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) |
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phnW
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2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
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COG0160
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4-aminobutyrate aminotransferase and related aminotransferases
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phnX
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Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
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Position: -240
Score: 5.3 Sequence: TTTTTGGTGTAGACCAGAAT
Position: -52
Score: 5.4 Sequence: AAACTGGTACATACCAATTA
Locus tag: Ping_2746
Name: phnS Funciton: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
Locus tag: Ping_2745
Name: phnT Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
Locus tag: Ping_2744
Name: phnU Funciton: 2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.
Locus tag: Ping_2743
Name: phnR Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family |
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phnS
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2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
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phnT
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2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
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phnU
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2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.
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phnR
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2-aminoethylphosphonate uptake and metabolism regulator, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |