Regulon of GntR in Psychromonas ingrahamii 37
| Regulator type: | Transcription factor |
| TF locus tag: | Ping_2929 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Regulog: | GntR - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - GntR
- By TF family - LacI
- By effector - Gluconate
- By pathway - Gluconate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -78
Score: 5 Sequence: TCAAGTTACGGCTAATATGT
Position: -64
Score: 5.6 Sequence: ATATGTTACCCGTAACTTAG
Locus tag: Ping_2932
Name: gntK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12)
Locus tag: Ping_2931
Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: Ping_2930
Name: eda Funciton: 2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14) |
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gntK
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Thermoresistant gluconokinase (EC 2.7.1.12)
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edd
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Phosphogluconate dehydratase (EC 4.2.1.12)
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eda
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2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
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Position: -98
Score: 6 Sequence: GTAAGTTACCGGTAACATTC
Position: -76
Score: 5.2 Sequence: ATCAGTTACCGGTAACCTAT
Locus tag: Ping_2933
Name: gntX Funciton: Predicted gluconate TRAP family transporter, DctP subunit
Locus tag: Ping_2934
Name: gntY Funciton: Predicted gluconate TRAP family transporter, DctQ subunit
Locus tag: Ping_2935
Name: gntZ Funciton: Predicted gluconate TRAP family transporter, DctM subunit
Locus tag: Ping_2936
Name: gntK2 Funciton: Thermoresistant gluconokinase (EC 2.7.1.12)
Locus tag: Ping_2937
Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
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gntX
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Predicted gluconate TRAP family transporter, DctP subunit
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gntY
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Predicted gluconate TRAP family transporter, DctQ subunit
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gntZ
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Predicted gluconate TRAP family transporter, DctM subunit
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gntK2
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Thermoresistant gluconokinase (EC 2.7.1.12)
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gnd
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6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
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Position: -21
Score: 6.1 Sequence: TTATGTTACAGGTAACATTT
Locus tag: Ping_2929
Name: gntR Funciton: Gluconate utilization transcriptional regulator GntR, LacI family |
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gntR
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Gluconate utilization transcriptional regulator GntR, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |