Regulons of Verminephrobacter eiseniae EF01-2

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	Aave_3515			3	2
TF	Bpro_5109		Sugar utilization	1	1
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	2	2
TF	Daci_3836			3	2
TF	EutR		Ectoine utilization	3	3
TF	FadP		Fatty acid degradation	6	4
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	7	3
TF	HrcA	Heat shock	Heat shock response	2	2
TF	HutC	cis-Urocanic acid	Histidine utilization	2	1
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	5	4
TF	MetR	Homocysteine	Methionine biosynthesis	2	2
TF	ModE	Molybdate	Molybdenum homeostasis	2	1
TF	ModE2	Molybdate	Molybdopterin biosynthesis	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	4	3
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	1	1
TF	PhnR2	2-aminoethylphosphonate	Phosphonoacetate utilization; Phosphonate utilization; 2-aminoethylphosphonate utilization	3	2
TF	PrpR	2-methylcitrate	Methylcitrate utilization	1	2
TF	SdhR		Tricarboxylic acid cycle	5	3
TF	TauR	Taurine	Taurine utilization	3	3
TF	UxuR2		Glucuronate utilization; Galacturonate utilization	8	3
TF	UxuR3		Glucuronate utilization	1	1
TF	VanR	Vanillate	Vanillate utilization	3	2
TF	Vapar_5644			1	1
TF	Veis_0044			3	3
TF	Veis_4721			1	1
TF	Zur2	Zinc ion, (Zn2+)	Zinc homeostasis	2	2
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	2	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --