Regulons of Verminephrobacter eiseniae EF01-2
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
Aave_3515 |
|
|
3 |
2 |
| TF |
Bpro_5109 |
|
Sugar utilization |
1 |
1 |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
2 |
2 |
| TF |
Daci_3836 |
|
|
3 |
2 |
| TF |
EutR |
|
Ectoine utilization |
3 |
3 |
| TF |
FadP |
|
Fatty acid degradation |
6 |
4 |
| TF |
HexR |
2-keto-3-deoxy-6-phosphogluconate |
Central carbohydrate metabolism |
7 |
3 |
| TF |
HrcA |
Heat shock |
Heat shock response |
2 |
2 |
| TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
2 |
1 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
1 |
1 |
| TF |
LexA |
DNA damage |
SOS response |
5 |
4 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
2 |
2 |
| TF |
ModE |
Molybdate |
Molybdenum homeostasis |
2 |
1 |
| TF |
ModE2 |
Molybdate |
Molybdopterin biosynthesis |
1 |
1 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
1 |
2 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
4 |
3 |
| TF |
PaaR |
Phenylacetyl-CoA |
Phenylacetic acid degradation |
1 |
1 |
| TF |
PhnR2 |
2-aminoethylphosphonate |
Phosphonoacetate utilization; Phosphonate utilization; 2-aminoethylphosphonate utilization |
3 |
2 |
| TF |
PrpR |
2-methylcitrate |
Methylcitrate utilization |
1 |
2 |
| TF |
SdhR |
|
Tricarboxylic acid cycle |
5 |
3 |
| TF |
TauR |
Taurine |
Taurine utilization |
3 |
3 |
| TF |
UxuR2 |
|
Glucuronate utilization; Galacturonate utilization |
8 |
3 |
| TF |
UxuR3 |
|
Glucuronate utilization |
1 |
1 |
| TF |
VanR |
Vanillate |
Vanillate utilization |
3 |
2 |
| TF |
Vapar_5644 |
|
|
1 |
1 |
| TF |
Veis_0044 |
|
|
3 |
3 |
| TF |
Veis_4721 |
|
|
1 |
1 |
| TF |
Zur2 |
Zinc ion, (Zn2+) |
Zinc homeostasis |
2 |
2 |
| RNA |
SAH_riboswitch |
S-adenosylhomocysteine |
Methionine metabolism |
2 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
3 |
1 |
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