Regulon of FadP in Verminephrobacter eiseniae EF01-2

Properties
Regulator type:	Transcription factor
TF locus tag:	Veis_1225
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Comamonadaceae
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 46 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Comamonadaceae
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -40 Score: 4.6 Sequence: ACGCACGCCCGTTCTT Locus tag: Veis_1792 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Veis_1791 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: Veis_1790 Name: acdH3 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Veis_1792	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Veis_1791	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Veis_1790	acdH3	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -103 Score: 5 Sequence: TGGAACGGTCGTTCGC Locus tag: Veis_3981 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Veis_3981	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: 31 Score: 5.7 Sequence: TAGAACGATCGTTCTT Locus tag: Veis_1225 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: Veis_1224 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Veis_1225	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Veis_1224	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -49 Score: 5.3 Sequence: ACGAACGATCGTGCTA Locus tag: Veis_2104 Name: acdQ Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13) Locus tag: Veis_2105 Name: acdP Funciton: Acyl-CoA dehydrogenase family protein
	Veis_2104	acdQ	Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
	Veis_2105	acdP	Acyl-CoA dehydrogenase family protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD