Regulon of SdhR in Verminephrobacter eiseniae EF01-2

Properties
Regulator type:	Transcription factor
TF locus tag:	Veis_4355
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Comamonadaceae
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 36 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -33 Score: 7.2 Sequence: TCTTATGTCTTATATAAGATATGATC Locus tag: Veis_4355 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Veis_4354 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Veis_4353 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Veis_4352 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Veis_4351 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Veis_4355	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Veis_4354	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Veis_4353	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Veis_4352	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Veis_4351	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -199 Score: 7.2 Sequence: GATCATATCTTATATAAGACATAAGA Locus tag: Veis_4356 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Veis_4357 Name: Aave_2209 Funciton: hypothetical protein Locus tag: Veis_4358 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	Veis_4356	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Veis_4357	Aave_2209	hypothetical protein
	Veis_4358	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -116 Score: 6.4 Sequence: TTTCATCTCTTCTATAAGACATAAGA Locus tag: Veis_3088 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Veis_3088	aceA	Isocitrate lyase (EC 4.1.3.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD