Regulon of NtrC in Verminephrobacter eiseniae EF01-2
| Regulator type: | Transcription factor |
| TF locus tag: | Veis_3151 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -202
Score: 4.4 Sequence: CTCCCCGAATGGGTGCG
Locus tag: Veis_3315
Name: CHP02001 Funciton: Conserved hypothetical protein CHP02001
Locus tag: Veis_3314
Name: glnK Funciton: Nitrogen regulatory protein P-II
Locus tag: Veis_3313
Name: amtB Funciton: Ammonium transporter |
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CHP02001
|
Conserved hypothetical protein CHP02001
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glnK
|
Nitrogen regulatory protein P-II
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amtB
|
Ammonium transporter
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Position: -219
Score: 5.1 Sequence: TGCACGCATTTGGCGCA
Position: -196
Score: 4.9 Sequence: GGCCCCGAATTGGTGCG
Locus tag: Veis_3154
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Veis_3153
Name: ntrZ Funciton: Conserved hypothetical signal peptide protein
Locus tag: Veis_3152
Name: ntrB Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Veis_3151
Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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ntrZ
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Conserved hypothetical signal peptide protein
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ntrB
|
putative nitrogen regulation protein NR(II)
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ntrC
|
Nitrogen regulation protein NR(I), Fis family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |