Profile of regulator NtrC in Comamonadaceae
Properties
| Regulator family: |
Fis |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Nitrogen assimilation |
| Effector: |
Phosphorylated NtrB, signal histidine kinase |
| Regulog: |
NtrC - Comamonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Acidovorax avenae subsp. citrulli AAC00-1
|
|
Aave_1442 |
glnA |
-207 |
5.6 |
TGCACGATTTTGGTGCG |
|
Aave_1442 |
glnA |
-184 |
4.9 |
GGCCCCGAATTGGTGCG |
|
Aave_0232 |
CHP02001 |
-180 |
5.1 |
CGCACCATTCGGGTGCG |
|
Aave_0232 |
CHP02001 |
-108 |
4.6 |
CGCACCCATTCGGAGCG |
|
Aave_2147 |
nrtA |
-282 |
4.8 |
CGCACGAAGAGGGTGCA |
|
Aave_2107 |
nasD |
-331 |
4.4 |
TGCACCGAAGCGGTTCA |
|
Acidovorax sp. JS42
|
|
Ajs_1189 |
glnA |
-134 |
5.1 |
TGCACGCGTTTGGTGCG |
|
Ajs_1189 |
glnA |
-206 |
5.7 |
TGCACCAAACGGGTGCA |
|
Ajs_0162 |
CHP02001 |
-155 |
5 |
TGCACCAGGCTGGTGCG |
|
Ajs_2839 |
nasD |
-328 |
4.5 |
TGCACCACGGCGGTGCG |
|
Ajs_2842 |
ybiB |
-120 |
4.6 |
GGCACCACTGCGGTGCA |
|
Ajs_2831 |
nrtA |
-314 |
5 |
TGCACAAATGCGGTGCA |
|
Comamonas testosteroni KF-1
|
|
CtesDRAFT_0725 |
glnA |
-238 |
4.7 |
TTCGCCAAGATGGTGCA |
|
CtesDRAFT_0725 |
glnA |
-261 |
5.9 |
TGCACCACATTGGTGCA |
|
CtesDRAFT_4075 |
CHP02001 |
-288 |
4.9 |
ATCACCTGTTTGGTGCA |
|
CtesDRAFT_4075 |
CHP02001 |
-228 |
5.6 |
CGCACCATCTTGGTGCA |
|
CtesDRAFT_4523 |
nrtA |
-232 |
4.5 |
TGCACCAAATATGGGCC |
|
CtesDRAFT_4526 |
nasD |
-219 |
4.8 |
TGCACAAAAGCAGTGCA |
|
Delftia acidovorans SPH-1
|
|
Daci_0301 |
CHP02001 |
-208 |
5.4 |
TGCACTATCTTGGTGCA |
|
Daci_0301 |
CHP02001 |
-136 |
4.7 |
TGCACAAAGCCGGTGCA |
|
Daci_5002 |
glnA |
-84 |
4.7 |
TGCACTCAATGGATGCA |
|
Daci_5002 |
glnA |
-286 |
5.8 |
TGCACTCATTTGGTGCA |
|
Daci_5002 |
glnA |
-214 |
5.6 |
TGCACCGATTTGGTGAA |
|
Daci_2377 |
nrtA |
-277 |
4.9 |
AGCACCGACTTGGTGCC |
|
Daci_2371 |
nasD |
-252 |
4.6 |
CGCACCGCTTTGATGCA |
|
Polaromonas naphthalenivorans CJ2
|
|
Pnap_2780 |
glnA |
-250 |
4.6 |
GGCCCTGAATTGGTGCG |
|
Pnap_2780 |
glnA |
-200 |
5 |
CGCACTTTTTTGGTGCT |
|
Pnap_0120 |
glnK |
-319 |
4.7 |
TGCATCAAAGTTGTGCA |
|
Pnap_0120 |
glnK |
-295 |
4.5 |
TGCATCATGATGGTGCG |
|
Pnap_1414 |
nrtA |
-334 |
4.7 |
GGCGCCGAAATGGTGCA |
|
Polaromonas sp. JS666
|
|
Bpro_1807 |
glnA |
-216 |
5.6 |
TGCGCTAAATTGGTGCA |
|
Bpro_1807 |
glnA |
-242 |
4.9 |
GGCCCCGAATTGGTGCG |
|
Bpro_0182 |
CHP02001 |
-153 |
5.5 |
TGCGCCAACTTGGTGCA |
|
Bpro_3273 |
narK |
-145 |
4.8 |
TGCACGCAATATGTGCA |
|
Bpro_3273 |
narK |
-48 |
4.8 |
TGCACTAACTTTGTGAA |
|
Rhodoferax ferrireducens DSM 15236
|
|
Rfer_2979 |
glnA |
-184 |
5.3 |
CGCACTTAATTGGTGCT |
|
Rfer_2979 |
glnA |
-236 |
4.7 |
GGCCCTGAATTGGTGCA |
|
Rfer_0472 |
glnK |
-203 |
5 |
TGCACCAAGTATGTGCG |
|
Rfer_2554 |
nrtA |
-315 |
5.1 |
TGCACAAAACTGGTGCC |
|
Variovorax paradoxus S110
|
|
Vapar_1632 |
glnA |
-139 |
5.7 |
TGCACCAATTTGGTGAT |
|
Vapar_0217 |
CHP02001 |
-207 |
4.9 |
CTCACCATTGTGGTGCG |
|
Vapar_2849 |
nasD |
-189 |
4.6 |
AGCACTGTTTTGGTGAG |
|
Vapar_3522 |
nrtA |
-313 |
4.3 |
CGCACAACAAGCGTGCA |
|
Vapar_3526 |
narK |
-166 |
4.6 |
AGCACCGCTTTGGTGAG |
|
Verminephrobacter eiseniae EF01-2
|
|
Veis_3315 |
CHP02001 |
-202 |
4.4 |
CTCCCCGAATGGGTGCG |
|
Veis_3154 |
glnA |
-219 |
5.1 |
TGCACGCATTTGGCGCA |
|
Veis_3154 |
glnA |
-196 |
4.9 |
GGCCCCGAATTGGTGCG |
|
Methylibium petroleiphilum PM1
|
|
Mpe_A2076 |
glnA |
-244 |
4.6 |
GGCCCCGAAATGGTGCG |
|
Leptothrix cholodnii SP-6
|
|
Lcho_3581 |
glnA |
-178 |
5.1 |
CGCACCATGTTTGTGCA |
|
Lcho_3581 |
glnA |
-225 |
4.6 |
GGCCCCGAAATGGTGCG |
|
Lcho_3942 |
glnK |
-193 |
5.3 |
TGCACTGAATTGGTGCC |
|
Lcho_3843 |
nrtA |
-300 |
4.4 |
TGCACGCCCATGGTGCG |
Export
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Regulatory Sites
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[ FASTA format ]
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