Regulons of Polaromonas sp. JS666
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
Aave_3430 |
|
|
2 |
2 |
| TF |
Bpro_5109 |
|
Sugar utilization |
1 |
2 |
| TF |
Bpro_5165 |
|
|
2 |
1 |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
1 |
1 |
| TF |
CueR |
Copper ion, (Cu+) |
Copper resistance |
4 |
4 |
| TF |
Daci_0595 |
|
Metabolite transport |
1 |
1 |
| TF |
Daci_3053 |
|
Glycolate utilization; Lactate utilization |
3 |
6 |
| TF |
FadP |
|
Fatty acid degradation |
9 |
4 |
| TF |
GabR2 |
Gamma-aminobutyric acid |
Gamma-aminobutyrate utilization |
2 |
1 |
| TF |
GguR |
|
Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization |
3 |
2 |
| TF |
GudR |
|
Glucarate utilization |
4 |
5 |
| TF |
HexR |
2-keto-3-deoxy-6-phosphogluconate |
Central carbohydrate metabolism |
7 |
4 |
| TF |
HrcA |
Heat shock |
Heat shock response |
2 |
2 |
| TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
7 |
7 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
1 |
1 |
| TF |
LexA |
DNA damage |
SOS response |
9 |
8 |
| TF |
LiuR |
|
Branched-chain amino acid degradation |
5 |
9 |
| TF |
MerR |
Mercury ion, (Hg2+) |
Mercury resistance |
2 |
2 |
| TF |
ModE2 |
Molybdate |
Molybdopterin biosynthesis |
2 |
2 |
| TF |
ModE3 |
Tungsten |
Tungsten homeostasis |
2 |
2 |
| TF |
NorR |
Nitric oxide |
Nitrosative stress response |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
1 |
2 |
| TF |
NsrR |
Nitric oxide |
Nitrosative stress response |
2 |
1 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
5 |
5 |
| TF |
PhnR2 |
2-aminoethylphosphonate |
Phosphonoacetate utilization; Phosphonate utilization; 2-aminoethylphosphonate utilization |
4 |
4 |
| TF |
SdhR |
|
Tricarboxylic acid cycle |
3 |
3 |
| TF |
SoxR |
Paraquat |
Superoxide stress response |
3 |
2 |
| TF |
TalR |
L-talarate |
L-talarate utilization |
2 |
3 |
| TF |
UxuR2 |
|
Glucuronate utilization; Galacturonate utilization |
7 |
4 |
| TF |
UxuR3 |
|
Glucuronate utilization |
2 |
6 |
| TF |
VanR |
Vanillate |
Vanillate utilization |
2 |
2 |
| TF |
YdcR |
|
|
1 |
2 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
1 |
1 |
| RNA |
SAH_riboswitch |
S-adenosylhomocysteine |
Methionine metabolism |
2 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
4 |
2 |
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