Regulon of PhnR2 in Polaromonas sp. JS666
| Regulator type: | Transcription factor |
| TF locus tag: | Bpro_3219, Bpro_4693 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Phosphonoacetate utilization; Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | 2-aminoethylphosphonate |
| Regulog: | PhnR2 - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - PhnR
- By TF family - GntR/Others
- By effector - 2-aminoethylphosphonate
- By pathway - Phosphonoacetate utilization
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -30
Score: 4.8 Sequence: ATTGTTGACATT
Locus tag: Bpro_4693
Name: phnR2 Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
Locus tag: Bpro_4692
Name: phnA Funciton: Phosphonoacetate hydrolase (EC 3.11.1.2)
Locus tag: Bpro_4691
Name: gap Funciton: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase |
|||
|
phnR2
|
2-aminoethylphosphonate uptake and metabolism regulator, GntR family
|
||
|
phnA
|
Phosphonoacetate hydrolase (EC 3.11.1.2)
|
||
|
gap
|
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
|
||
|
Position: -161
Score: 4.8 Sequence: AATGTCAACAAT
Locus tag: Bpro_4694
Name: phnS Funciton: 2-aminoethylphosphonate ABC transport system, periplasmic component |
|||
|
phnS
|
2-aminoethylphosphonate ABC transport system, periplasmic component
|
||
|
Position: -148
Score: 5.2 Sequence: ATTGTCAACAAT
Locus tag: Bpro_3218
Name: phnT Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein
Locus tag: Bpro_3217
Name: phnU Funciton: 2-aminoethylphosphonate ABC transporter permease component
Locus tag: Bpro_3216
Name: phnW Funciton: 2-aminoethylphosphonate--pyruvate aminotransferase (EC 2.6.1.37) |
|||
|
phnT
|
2-aminoethylphosphonate ABC transporter, ATP-binding protein
|
||
|
phnU
|
2-aminoethylphosphonate ABC transporter permease component
|
||
|
phnW
|
2-aminoethylphosphonate--pyruvate aminotransferase (EC 2.6.1.37)
|
||
|
Position: -68
Score: 5.2 Sequence: ATTGTTGACAAT
Locus tag: Bpro_3219
Name: phnR2 Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
Locus tag: Bpro_3220
Name: phnA Funciton: Phosphonoacetate hydrolase (EC 3.11.1.2)
Locus tag: Bpro_3221
Name: gap Funciton: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
Locus tag: Bpro_3222
Name: null Funciton: Alanine dehydrogenase (EC 1.4.1.1) |
|||
|
phnR2
|
2-aminoethylphosphonate uptake and metabolism regulator, GntR family
|
||
|
phnA
|
Phosphonoacetate hydrolase (EC 3.11.1.2)
|
||
|
gap
|
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
|
||
|
Alanine dehydrogenase (EC 1.4.1.1)
|
|||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |