Regulon of SdhR in Polaromonas sp. JS666

Properties
Regulator type:	Transcription factor
TF locus tag:	Bpro_3599
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Comamonadaceae
Statistics of regulated genes:
- Genes	12
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 36 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -49 Score: 7.5 Sequence: TCTTATGTCTTATATAAGATATGATA Locus tag: Bpro_3599 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Bpro_3600 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Bpro_3601 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Bpro_3602 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Bpro_3603 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Bpro_3604 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Bpro_3605 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Bpro_3599	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Bpro_3600	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Bpro_3601	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Bpro_3602	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Bpro_3603	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Bpro_3604	COG2938	succinate dehydrogenase iron-sulfur subunit
	Bpro_3605	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -239 Score: 7.5 Sequence: TATCATATCTTATATAAGACATAAGA Locus tag: Bpro_3598 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Bpro_3597 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) Locus tag: Bpro_3596 Name: Aave_2209 Funciton: hypothetical protein Locus tag: Bpro_3595 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	Bpro_3598	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Bpro_3597	citE	Citrate lyase beta chain (EC 4.1.3.6)
	Bpro_3596	Aave_2209	hypothetical protein
	Bpro_3595	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -102 Score: 7.1 Sequence: ATTTTTGTCTTATATAAGACATAAGA Locus tag: Bpro_2101 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Bpro_2101	aceA	Isocitrate lyase (EC 4.1.3.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD