Regulon of SdhR in Polaromonas sp. JS666
| Regulator type: | Transcription factor |
| TF locus tag: | Bpro_3599 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Regulog: | SdhR - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/Others
- By pathway - Tricarboxylic acid cycle
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -49
Score: 7.5 Sequence: TCTTATGTCTTATATAAGATATGATA
Locus tag: Bpro_3599
Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bpro_3600
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bpro_3601
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bpro_3602
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bpro_3603
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bpro_3604
Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bpro_3605
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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sdhR
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Transcriptional regulator of TCA cycle, GntR family
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sdhC
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Succinate dehydrogenase cytochrome b-556 subunit
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sdhD
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Succinate dehydrogenase hydrophobic membrane anchor protein
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sdhA
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Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
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sdhB
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Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
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COG2938
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succinate dehydrogenase iron-sulfur subunit
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gltA
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Citrate synthase (si) (EC 2.3.3.1)
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Position: -239
Score: 7.5 Sequence: TATCATATCTTATATAAGACATAAGA
Locus tag: Bpro_3598
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bpro_3597
Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Bpro_3596
Name: Aave_2209 Funciton: hypothetical protein
Locus tag: Bpro_3595
Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3) |
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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citE
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Citrate lyase beta chain (EC 4.1.3.6)
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Aave_2209
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hypothetical protein
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acnB
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Aconitate hydratase (EC 4.2.1.3)
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Position: -102
Score: 7.1 Sequence: ATTTTTGTCTTATATAAGACATAAGA
Locus tag: Bpro_2101
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1) |
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aceA
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Isocitrate lyase (EC 4.1.3.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |