Regulon of UxuR3 in Polaromonas sp. JS666
| Regulator type: | Transcription factor |
| TF locus tag: | Bpro_3977 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization |
| Effector: | |
| Regulog: | UxuR3 - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/Others
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -240
Score: 5.1 Sequence: ATAGTGGTAAACCACTAA
Position: -217
Score: 5.9 Sequence: AAATTGGTATACCACTTA
Position: -61
Score: 5.1 Sequence: TAATTGGTAAACCATCTT
Locus tag: Bpro_3977
Name: uxuR3 Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Bpro_3978
Name: Bpro_3978 Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein |
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uxuR3
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Predicted transcriptional regulator for glucuronate utilization, GntR family
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Bpro_3978
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Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
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Position: -297
Score: 5.1 Sequence: AAGATGGTTTACCAATTA
Position: -141
Score: 5.9 Sequence: TAAGTGGTATACCAATTT
Position: -118
Score: 5.1 Sequence: TTAGTGGTTTACCACTAT
Locus tag: Bpro_3976
Name: COG0834 Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Bpro_3975
Name: COG0765 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3974
Name: COG0765-2 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3973
Name: COG1126 Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Bpro_3972
Name: COG2055 Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bpro_3971
Name: COG2706 Funciton: 3-carboxymuconate cyclase
Locus tag: Bpro_3970
Name: uxuA Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
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COG0834
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ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
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COG0765
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ABC-type amino acid transport system, permease component
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COG0765-2
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ABC-type amino acid transport system, permease component
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COG1126
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ABC-type polar amino acid transport system, ATPase component
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COG2055
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Malate dehydrogenase (EC 1.1.1.37)
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COG2706
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3-carboxymuconate cyclase
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uxuA
|
D-mannonate oxidoreductase (EC 1.1.1.57)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |