Regulons of Chromobacterium violaceum ATCC 12472

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	3	2
TF	CV1517			1	1
TF	CV1900		Metabolite transport	4	3
TF	CV4096			1	1
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	FruR2	Fructose-1-phosphate	Fructose utilization	2	4
TF	GntR	Gluconate	Gluconate utilization	1	1
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	5	5
TF	HrcA	Heat shock	Heat shock response	2	2
TF	HutC	cis-Urocanic acid	Histidine utilization	1	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LiuR		Branched-chain amino acid degradation	6	12
TF	LldR	L-lactate	Lactate utilization	2	2
TF	MetR	Homocysteine	Methionine biosynthesis	2	2
TF	NagQ	N-acetylglucosamine	N-acetylglucosamine utilization	10	12
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	5
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	4
TF	NsrR2	Nitric oxide	Nitrosative stress response	4	6
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	3	4
TF	PhnF		Phosphonate utilization	2	2
TF	PsrA	Oleate	Fatty acid degradation	12	12
TF	SdhR		Tricarboxylic acid cycle	7	2
TF	SoxR	Paraquat	Superoxide stress response	1	1
TF	TreR	Trehalose	Trehalose utilization	1	2
TF	YdcR			1	1
TF	Zur2	Zinc ion, (Zn2+)	Zinc homeostasis	1	1
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	2	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --