Regulon of NtrC in Chromobacterium violaceum ATCC 12472
| Regulator type: | Transcription factor |
| TF locus tag: | CV3592 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Various betaproteobacteria |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -176
Score: 5.2 Sequence: TGCACCAAAACCGTGCA
Locus tag: CV4002
Name: glnK Funciton: Nitrogen regulatory protein P-II
Locus tag: CV4003
Name: amtB Funciton: Ammonium transporter |
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glnK
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Nitrogen regulatory protein P-II
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amtB
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Ammonium transporter
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Position: -118
Score: 6 Sequence: TGCACCAAAATGGTGCA
Locus tag: CV3591
Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: CV3592
Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family |
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ntrB
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Nitrogen regulation protein NR(II) (EC 2.7.3.-)
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ntrC
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Nitrogen regulation protein NR(I), Fis family
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Position: -202
Score: 5.2 Sequence: GGCACCATATCGGTGCA
Position: -172
Score: 4.7 Sequence: GGCACCAGAATGGTTCA
Locus tag: CV3589
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: CV3590
Name: ntrZ Funciton: Conserved hypothetical signal peptide protein |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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ntrZ
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Conserved hypothetical signal peptide protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |