Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Chromobacterium violaceum ATCC 12472

Properties
Regulator type: Transcription factor
TF locus tag: CV3592
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Various betaproteobacteria
Statistics of regulated genes:
- Genes 6
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 47 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -176
Score: 5.2
Sequence: TGCACCAAAACCGTGCA
Locus tag: CV4002
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: CV4003
Name: amtB
Funciton: Ammonium transporter
glnK
Nitrogen regulatory protein P-II
amtB
Ammonium transporter

Position: -118
Score: 6
Sequence: TGCACCAAAATGGTGCA
Locus tag: CV3591
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: CV3592
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC
Nitrogen regulation protein NR(I), Fis family

Position: -202
Score: 5.2
Sequence: GGCACCATATCGGTGCA
Position: -172
Score: 4.7
Sequence: GGCACCAGAATGGTTCA
Locus tag: CV3589
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: CV3590
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
glnA
Glutamine synthetase type I (EC 6.3.1.2)
ntrZ
Conserved hypothetical signal peptide protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD