Profile of regulator NtrC in Various betaproteobacteria
Properties
| Regulator family: |
Fis |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Nitrogen assimilation |
| Effector: |
Phosphorylated NtrB, signal histidine kinase |
| Regulog: |
NtrC - Various betaproteobacteria |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Azoarcus sp. EbN1
|
|
ebA4116 |
ntrC |
-23 |
5.3 |
CGCACCAAAAAAGTGCA |
|
ebA3154 |
CHP02001 |
20 |
5 |
CGCACCGTTCCGGTGCA |
|
ebA4121 |
glnA |
-253 |
5.5 |
TGCACCATGATGGTGCG |
|
ebA4609 |
amtB2 |
-159 |
5.2 |
CGCACCGTAATTGTGCA |
|
ebA2252 |
gltB |
-96 |
5.2 |
TGCACAGTTTTGGTGCG |
|
Thauera sp. MZ1T
|
|
Tmz1t_0595 |
CHP02001 |
-175 |
5.4 |
CGCACCACATTGGTGCG |
|
Tmz1t_3651 |
ntrC |
-23 |
5.4 |
CGCACCAGAATAGTGCA |
|
Tmz1t_3648 |
glnA |
-196 |
5.1 |
CGCACCATTGAAGTGCA |
|
Tmz1t_3648 |
glnA |
-228 |
5.5 |
CGCACCATAGTAGTGCA |
|
Tmz1t_0457 |
amtB2 |
-115 |
4.5 |
CGCACCCCTCTGGTGCG |
|
Tmz1t_0457 |
amtB2 |
-49 |
4.4 |
CGCACTGGAACGGTGCT |
|
Tmz1t_0842 |
gltB |
-141 |
5.7 |
TGCACCAGATTGGTGCA |
|
Tmz1t_1142 |
nasD |
-290 |
4.3 |
CGCACCAGGGCTGTGCA |
|
Tmz1t_1142 |
nasD |
-258 |
4.7 |
TGCACCGCAGCAGTGCG |
|
Dechloromonas aromatica RCB
|
|
Daro_3763 |
glnA |
-214 |
5.7 |
TGCACCAAAATAGTGCG |
|
Daro_0052 |
CHP02001 |
-148 |
5 |
CGCACAGTTTTGGTGCG |
|
Daro_3763 |
glnA |
-183 |
5 |
TGCACGATCGTGGTGCA |
|
Daro_3703 |
amtB2 |
-119 |
4.9 |
TGCACCAAACAGGTGCT |
|
Daro_3703 |
amtB2 |
-53 |
4.8 |
TGCACTGGAATGGTGCT |
|
Daro_0816 |
nasD |
-199 |
5.3 |
TGCACGAATTTGGTGCG |
|
Daro_3759 |
ntrB |
-204 |
5.6 |
TGCACCAATACGGTGCG |
|
Thiobacillus denitrificans
|
|
Tbd_2503 |
glnA |
-188 |
4.3 |
CGCCCTATAATGGAGCG |
|
Tbd_2503 |
glnA |
-220 |
5 |
TGCACCAAGACGGGGCA |
|
Tbd_1701 |
amtB2 |
-114 |
4.3 |
CGCACTTCGGCGGTGCA |
|
Tbd_2310 |
nasA |
-138 |
4.4 |
CGCACCAATTTGCGGCG |
|
Chromobacterium violaceum ATCC 12472
|
|
CV3591 |
ntrB |
-118 |
6 |
TGCACCAAAATGGTGCA |
|
CV4002 |
glnK |
-176 |
5.2 |
TGCACCAAAACCGTGCA |
|
CV3589 |
glnA |
-202 |
5.2 |
GGCACCATATCGGTGCA |
|
CV3589 |
glnA |
-172 |
4.7 |
GGCACCAGAATGGTTCA |
|
Laribacter hongkongensis HLHK9
|
|
LHK_01876 |
glnA |
-226 |
5.4 |
TTCACCATTTTGGTGCA |
|
LHK_01876 |
glnA |
-255 |
5.1 |
TGCACCATTGATGTGCA |
|
Methylobacillus flagellatus KT
|
|
Mfla_0433 |
glnK |
-188 |
5.3 |
TGAACTATTTTGGTGCA |
|
Mfla_2447 |
glnA |
-189 |
5.6 |
AGCACCAATATGGTGCA |
|
Mfla_2447 |
glnA |
-158 |
4.9 |
CGCAATATAGTGGTGCA |
|
Mfla_0433 |
glnK |
-206 |
5.1 |
TGCACATCATTGGTGCA |
|
Methylotenera mobilis JLW8
|
|
Mmol_2138 |
glnA |
-153 |
5 |
TGCATTGTATTGGTGCA |
|
Mmol_2140 |
ntrB |
-268 |
5.7 |
TGCACCTAAATGGTGCA |
|
Mmol_2140 |
ntrB |
-9 |
4.9 |
AGCACTATTATGGTTCA |
|
Mmol_2138 |
glnA |
-183 |
5.3 |
TGCACCAAAAATGTGCA |
|
Mmol_2289 |
CHP02001 |
-288 |
4.7 |
CGCCCTTTAATAGTGCA |
|
Mmol_1494 |
amtB2 |
-152 |
5.1 |
TGCACATATTTAGTGCA |
|
Mmol_1494 |
amtB2 |
-122 |
5.1 |
TGCACAATGTTAGTGCA |
|
Mmol_1652 |
nasD |
-219 |
4.3 |
TGCACCAAAGTAGTAAA |
|
Methylophilales bacterium HTCC2181
|
|
MB2181_01245 |
CHP02001 |
-282 |
4.7 |
TGCCCTGAAGTAGTGCA |
|
MB2181_03520 |
amtB2 |
-134 |
5.3 |
TGCACCAAAATAATGCA |
|
MB2181_01610 |
glnA |
-173 |
5.5 |
TGCACTAAATTAGTGCG |
|
MB2181_01610 |
glnA |
-141 |
4.4 |
AGCATTTAATTGGTGCA |
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Regulatory Sites
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