Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagQ in Chromobacterium violaceum ATCC 12472

Properties
Regulator type: Transcription factor
TF locus tag: CV0555
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Regulog: NagQ - Various betaproteobacteria
Statistics of regulated genes:
- Genes 18
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -63
Score: -1.6
Sequence: AATACCACTTCAATACAA
Locus tag: CV3316
Name: cdxA
Funciton: Chitodextrinase precursor (EC 3.2.1.14)
CV3316
cdxA
Chitodextrinase precursor (EC 3.2.1.14)
Position: -94
Score: 4.8
Sequence: CGGCATTTATTTGGTATA
Locus tag: CV3490
Name: cga
Funciton: Glucoamylase (EC 3.2.1.3)
CV3490
cga
Glucoamylase (EC 3.2.1.3)
Position: -98
Score: -1.6
Sequence: GATACCAATGTAATACCA
Locus tag: CV4240
Name: chiC
Funciton: Chitinase (EC 3.2.1.14)
CV4240
chiC
Chitinase (EC 3.2.1.14)
Position: -54
Score: 4.7
Sequence: TGGTTCCATAGTGGTATT
Locus tag: CV1897
Name: chiA
Funciton: Chitinase (EC 3.2.1.14)
CV1897
chiA
Chitinase (EC 3.2.1.14)
Position: -137
Score: 5.7
Sequence: TGGTATTGACGTGGTATT
Position: -126
Score: 6
Sequence: TGGTATTAATGTGGTATT
Locus tag: CV0555
Name: nagQ
Funciton: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Locus tag: CV0556
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: CV0557
Name: nagB2
Funciton: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
Locus tag: CV0558
Name: ptsI
Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Locus tag: CV0559
Name: nagE
Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
CV0555
nagQ
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
CV0556
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
CV0557
nagB2
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
CV0558
ptsI
PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
CV0559
nagE
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -262
Score: -0.9
Sequence: TATACCAAATAAATGCCG
Locus tag: CV3489
Name: cbp21
Funciton: Chitin binding protein
CV3489
cbp21
Chitin binding protein
Position: -100
Score: -1.1
Sequence: AATACCAATTAAATACCA
Locus tag: CV1493
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
CV1493
hex
Beta-hexosaminidase (EC 3.2.1.52)
Position: -43
Score: -1.4
Sequence: AATACCAATCAAATACCA
Position: -32
Score: -1
Sequence: AATACCAATTGAACGTCA
Locus tag: CV2935
Name: chi
Funciton: Chitinase (EC 3.2.1.14)
CV2935
chi
Chitinase (EC 3.2.1.14)
Position: -88
Score: -0.8
Sequence: CATACCAATTGAAGACCA
Position: -77
Score: 0.1
Sequence: AAGACCAATATAAGACCA
Locus tag: CV0263
Name: ybfM
Funciton: N-acetylglucosamine-regulated outer membrane porin
Locus tag: CV0262
Name: null
Funciton: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
Locus tag: CV0261
Name: null
Funciton: N-Acetyl-D-glucosamine-related ABC transport system, permease protein 1
Locus tag: CV0260
Name: null
Funciton: N-Acetyl-D-glucosamine ABC transport system, permease protein 2
Locus tag: CV0259
Name: nagZ
Funciton: Beta N-acetyl-glucosaminidase (EC 3.2.1.52)
Locus tag: CV0258
Name: hex2
Funciton: N-Acetyl-D-glucosamine ABC transport system ATP-binding protein
CV0263
ybfM
N-acetylglucosamine-regulated outer membrane porin
CV0262
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
CV0261
N-Acetyl-D-glucosamine-related ABC transport system, permease protein 1
CV0260
N-Acetyl-D-glucosamine ABC transport system, permease protein 2
CV0259
nagZ
Beta N-acetyl-glucosaminidase (EC 3.2.1.52)
CV0258
hex2
N-Acetyl-D-glucosamine ABC transport system ATP-binding protein
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