Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of BirA in Chromobacterium violaceum ATCC 12472

Properties
Regulator type: Transcription factor
TF locus tag: CV0486
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BirA - Various betaproteobacteria
Statistics of regulated genes:
- Genes 7
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -132
Score: 8
Sequence: TTGTCAATT-(14)-GTTTGACAG
Locus tag: CV4381
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: CV4380
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: CV4379
Name: null
Funciton: Sensory box/GGDEF family protein
Locus tag: CV4378
Name: CV3478
Funciton: Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17)
Locus tag: CV4377
Name: bioH
Funciton: Biotin synthesis protein bioH
Locus tag: CV4376
Name: bioC
Funciton: Biotin synthesis protein bioC
bioB
Biotin synthase (EC 2.8.1.6)
bioF
8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Sensory box/GGDEF family protein
CV3478
Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17)
bioH
Biotin synthesis protein bioH
bioC
Biotin synthesis protein bioC

Position: -39
Score: 8
Sequence: CTGTCAAAC-(14)-AATTGACAA
Locus tag: CV4382
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040
Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD