Statistics of regulated genes

Genome	Genes	Operons
Azoarcus sp. EbN1
Thauera sp. MZ1T
Dechloromonas aromatica RCB
Nitrosomonas europaea ATCC 19718	5	1
Nitrosospira multiformis ATCC 25196	6	2
Thiobacillus denitrificans	6	2
Chromobacterium violaceum ATCC 12472	7	2
Neisseria meningitidis MC58
Laribacter hongkongensis HLHK9	3	2
Methylobacillus flagellatus KT	5	1
Methylotenera mobilis JLW8	6	2
Methylophilales bacterium HTCC2181	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes													Function
CRON 1.
bioB	Azoarcus sp. EbN1 Gene: ebA1066: Biotin synthase (EC 2.8.1.6)	Thauera sp. MZ1T Gene: Tmz1t_1536: Biotin synthase (EC 2.8.1.6)	Dechloromonas aromatica RCB Gene: Daro_0618: Biotin synthase (EC 2.8.1.6)	* Nitrosomonas europaea ATCC 19718 Site: position = -96 score = 7.57847 sequence = CTGTTTAAT-(14)-AATTGACAA Gene: NE2300: Biotin synthase (EC 2.8.1.6)	* Nitrosospira multiformis ATCC 25196 Site: position = -164 score = 7.16729 sequence = TAGTTCAAA-(14)-AATTGACAA Gene: Nmul_A1129: Biotin synthase (EC 2.8.1.6)	* Thiobacillus denitrificans Site: position = -583 score = 7.58393 sequence = ATGTTCAAT-(15)-ATTTGACAG Gene: Tbd_0319: Biotin synthase (EC 2.8.1.6)	* Chromobacterium violaceum ATCC 12472 Site: position = -132 score = 7.97831 sequence = TTGTCAATT-(14)-GTTTGACAG Gene: CV4381: Biotin synthase (EC 2.8.1.6)	2 Neisseria meningitidis MC58 Gene: NMB1184: Biotin synthase (EC 2.8.1.6) Gene: NMB1146: Biotin synthase (EC 2.8.1.6)	* Laribacter hongkongensis HLHK9 Site: position = -900 score = 6.99832 sequence = CTGTTTATA-(14)-GTTTGACAG Gene: LHK_00097: Biotin synthase (EC 2.8.1.6)	* Methylobacillus flagellatus KT Site: position = -469 score = 6.72128 sequence = ATGTAAATG-(15)-GCTTGACAA Gene: Mfla_2164: Biotin synthase (EC 2.8.1.6)	* Methylotenera mobilis JLW8 Site: position = -118 score = 7.30061 sequence = TTGTTCAAA-(15)-TGTTGACAA Gene: Mmol_0572: Biotin synthase (EC 2.8.1.6)	* Methylophilales bacterium HTCC2181 Site: position = -81 score = 7.02877 sequence = TTGTTAAAA-(14)-GCTTAACCA Gene: MB2181_06030: Biotin synthase (EC 2.8.1.6)	Biotin synthase (EC 2.8.1.6)
bioF	Azoarcus sp. EbN1 Gene: ebA6018: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Thauera sp. MZ1T	Dechloromonas aromatica RCB Gene: Daro_2897: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Nitrosomonas europaea ATCC 19718 Gene: NE2299: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A1130: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Thiobacillus denitrificans Gene: Tbd_0320: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Chromobacterium violaceum ATCC 12472 Gene: CV4380: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Neisseria meningitidis MC58 Gene: NMB0472: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Laribacter hongkongensis HLHK9 Gene: LHK_00098: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Methylobacillus flagellatus KT Gene: Mfla_2163: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Methylotenera mobilis JLW8 Gene: Mmol_0573: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	Methylophilales bacterium HTCC2181 Gene: MB2181_06025: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
CV4379	Azoarcus sp. EbN1	Thauera sp. MZ1T	Dechloromonas aromatica RCB	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Chromobacterium violaceum ATCC 12472 Gene: CV4379: Sensory box/GGDEF family protein	Neisseria meningitidis MC58	Laribacter hongkongensis HLHK9	Methylobacillus flagellatus KT	Methylotenera mobilis JLW8	Methylophilales bacterium HTCC2181	Sensory box/GGDEF family protein
CV3478	Azoarcus sp. EbN1	Thauera sp. MZ1T	Dechloromonas aromatica RCB	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	Chromobacterium violaceum ATCC 12472 Gene: CV4378: Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17)	Neisseria meningitidis MC58	Laribacter hongkongensis HLHK9	Methylobacillus flagellatus KT	Methylotenera mobilis JLW8	Methylophilales bacterium HTCC2181	Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17)
bioH	Azoarcus sp. EbN1 Gene: ebA6017: Biotin synthesis protein bioH	Thauera sp. MZ1T Gene: Tmz1t_1979: Biotin synthesis protein bioH	Dechloromonas aromatica RCB Gene: Daro_2898: Biotin synthesis protein bioH	Nitrosomonas europaea ATCC 19718 Gene: NE2298: Biotin synthesis protein bioH	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A1131: Biotin synthesis protein bioH	Thiobacillus denitrificans Gene: Tbd_0321: Biotin synthesis protein bioH	Chromobacterium violaceum ATCC 12472 Gene: CV4377: Biotin synthesis protein bioH	Neisseria meningitidis MC58 Gene: NMB0270: Biotin synthesis protein bioH	Laribacter hongkongensis HLHK9 Gene: LHK_03115: Biotin synthesis protein bioH	Methylobacillus flagellatus KT Gene: Mfla_2162: Biotin synthesis protein bioH	Methylotenera mobilis JLW8 Gene: Mmol_0574: Biotin synthesis protein bioH	Methylophilales bacterium HTCC2181 Gene: MB2181_06020: Biotin synthesis protein bioH	Biotin synthesis protein bioH
bioC	Azoarcus sp. EbN1 Gene: ebA6013: Biotin synthesis protein bioC	Thauera sp. MZ1T	Dechloromonas aromatica RCB Gene: Daro_2899: Biotin synthesis protein bioC	Nitrosomonas europaea ATCC 19718 Gene: NE2297: Biotin synthesis protein bioC	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A1132: Biotin synthesis protein bioC	Thiobacillus denitrificans Gene: Tbd_0322: Biotin synthesis protein bioC	Chromobacterium violaceum ATCC 12472 Gene: CV4376: Biotin synthesis protein bioC	Neisseria meningitidis MC58 Gene: NMB0474: Biotin synthesis protein bioC	Laribacter hongkongensis HLHK9 Gene: LHK_03114: Biotin synthesis protein bioC	Methylobacillus flagellatus KT Gene: Mfla_2161: Biotin synthesis protein bioC	Methylotenera mobilis JLW8 Gene: Mmol_0575: Biotin synthesis protein bioC	Methylophilales bacterium HTCC2181 Gene: MB2181_06015: Biotin synthesis protein bioC	Biotin synthesis protein bioC
bioD	Azoarcus sp. EbN1 Gene: ebA6011: Dethiobiotin synthetase (EC 6.3.3.3)	Thauera sp. MZ1T	Dechloromonas aromatica RCB Gene: Daro_2900: Dethiobiotin synthetase (EC 6.3.3.3)	Nitrosomonas europaea ATCC 19718 Gene: NE2296: Dethiobiotin synthetase (EC 6.3.3.3)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A1133: Dethiobiotin synthetase (EC 6.3.3.3)	Thiobacillus denitrificans Gene: Tbd_0323: Dethiobiotin synthetase (EC 6.3.3.3)	Chromobacterium violaceum ATCC 12472 Gene: CV0598: Dethiobiotin synthetase (EC 6.3.3.3)	Neisseria meningitidis MC58	Laribacter hongkongensis HLHK9 Gene: LHK_00168: Dethiobiotin synthetase (EC 6.3.3.3)	Methylobacillus flagellatus KT Gene: Mfla_2160: Dethiobiotin synthetase (EC 6.3.3.3)	Methylotenera mobilis JLW8 Gene: Mmol_0576: Dethiobiotin synthetase (EC 6.3.3.3)	Methylophilales bacterium HTCC2181 Gene: MB2181_06010: Dethiobiotin synthetase (EC 6.3.3.3)	Dethiobiotin synthetase (EC 6.3.3.3)
CRON 2.
COG1040	Azoarcus sp. EbN1 Gene: ebA1065: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	Thauera sp. MZ1T Gene: Tmz1t_1537: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	Dechloromonas aromatica RCB Gene: Daro_0617: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	Nitrosomonas europaea ATCC 19718	* Nitrosospira multiformis ATCC 25196 Site: position = 3 score = 7.16729 sequence = TTGTCAATT-(14)-TTTGAACTA Gene: Nmul_A1128: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	* Thiobacillus denitrificans Site: position = -25 score = 7.58393 sequence = CTGTCAAAT-(15)-ATTGAACAT Gene: Tbd_0317: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	* Chromobacterium violaceum ATCC 12472 Site: position = -39 score = 7.97831 sequence = CTGTCAAAC-(14)-AATTGACAA Gene: CV4382: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	Neisseria meningitidis MC58 Gene: NMB0269: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	* Laribacter hongkongensis HLHK9 Site: position = 12 score = 6.99832 sequence = CTGTCAAAC-(14)-TATAAACAG Gene: LHK_00099: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	Methylobacillus flagellatus KT Gene: Mfla_2181: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	* Methylotenera mobilis JLW8 Site: position = 17 score = 7.30061 sequence = TTGTCAACA-(15)-TTTGAACAA Gene: Mmol_0571: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy	Methylophilales bacterium HTCC2181	Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD