Regulons of Pseudoalteromonas haloplanktis TAC125

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis; Arginine degradation	6	8
TF	BirA	Biotin	Biotin biosynthesis	3	1
TF	CPS_4612		Metabolite transport	1	1
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	FabR	Unsaturated acyl-ACP; Unsaturated acyl-CoA	Fatty acid biosynthesis	8	8
TF	FadR	Palmitoyl-CoA; Oleoyl-CoA	Fatty acid degradation	7	5
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	23	17
TF	GalR	Galactose	Galactose utilization	2	2
TF	GntR	Gluconate	Gluconate utilization	3	5
TF	HmgS		Tyrosine degradation	2	2
TF	HrcA	Heat shock	Heat shock response	1	1
TF	HutC	cis-Urocanic acid	Histidine utilization	4	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	4	6
TF	LexA	DNA damage	SOS response	12	15
TF	LiuR		Branched-chain amino acid degradation	10	12
TF	MalR	Maltose	Maltose utilization; Maltodextrin utilization	4	4
TF	MetJ	S-adenosylmethionine	Methionine metabolism; Methionine biosynthesis	14	14
TF	MetR	Homocysteine	Methionine biosynthesis	4	4
TF	NorR	Nitric oxide	Nitrosative stress response	2	4
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NsrR	Nitric oxide	Nitrosative stress response	2	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	3	3
TF	PdhR	Pyruvate	Pyruvate metabolism	3	3
TF	PrpR	2-methylcitrate	Methylcitrate utilization	2	3
TF	TyrR1	Tyrosine; Phenylalanine	Aromatic amino acid metabolism	6	5
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	4
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	TPP			3	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --